Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0436
         (714 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0999 + 22121029-22121235,22121819-22122082,22122123-221223...    30   2.1  
06_01_0077 + 626126-626137,626222-627421                               29   2.8  
09_06_0289 - 22053561-22055666,22055745-22055771                       29   3.7  
10_04_0003 + 7382881-7383285,7383455-7383631,7383661-7383978           29   4.8  
06_03_0002 - 15280292-15281550,15282714-15282840                       28   6.4  
07_03_1363 - 26022333-26023225,26023319-26023451                       28   8.5  

>10_08_0999 +
           22121029-22121235,22121819-22122082,22122123-22122324,
           22122456-22122590,22122668-22122778,22122871-22122959,
           22123237-22123299,22123461-22123636,22123785-22123887,
           22124286-22124461,22124625-22124733,22124851-22124943,
           22126294-22126435,22126655-22126671
          Length = 628

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/64 (25%), Positives = 26/64 (40%)
 Frame = +2

Query: 236 SDIRLQPSSGRDLVMLKIVLARALYPQVAVADEFNYCKSVAEQLYHTWSKPFVFLHPTSY 415
           SDI +    G D +ML    A   +P  AV       +     LY+  + P +  HP + 
Sbjct: 393 SDIAIAVREGSDAIMLSGETAHGKFPLKAVKVMHTVAQRTESSLYNPTTSPSLVAHPQAL 452

Query: 416 FGKQ 427
             ++
Sbjct: 453 LNEE 456


>06_01_0077 + 626126-626137,626222-627421
          Length = 403

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 391 EGLTPSVVQLFGYGLAIIEFIGNCYLW 311
           EGL  S+V L G  L ++ F G C+ W
Sbjct: 40  EGLLHSIVALLGSFLDLLAFTGTCHSW 66


>09_06_0289 - 22053561-22055666,22055745-22055771
          Length = 710

 Score = 29.1 bits (62), Expect = 3.7
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +3

Query: 30  RALRHGQMKQLKDMRRQYKQKSAEDSKRKKRLKIDSWEIV 149
           RA +   +K+ K  +++ K+K  +  K+KK++ ID W  V
Sbjct: 2   RACKQNLIKKKKKKKKK-KKKKKKKKKKKKKMMIDVWSAV 40


>10_04_0003 + 7382881-7383285,7383455-7383631,7383661-7383978
          Length = 299

 Score = 28.7 bits (61), Expect = 4.8
 Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +3

Query: 3   EPETMSSAERALRHGQMKQLKDMRRQ-YKQKSAEDSKRKKRL 125
           +PET + A+       M  L+DM RQ  KQ+ A ++ R+ +L
Sbjct: 95  DPETQAEADMEAMRQNMTWLQDMLRQMQKQQQAYEAARRTKL 136


>06_03_0002 - 15280292-15281550,15282714-15282840
          Length = 461

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 23/86 (26%), Positives = 31/86 (36%), Gaps = 7/86 (8%)
 Frame = +1

Query: 241 YPAPAVQWTGPCHAE--DCVSQSAVPTSSSCR*IQLLQVRSRTIV-----PHLE*ALRVP 399
           +P     W G  H +   C      PT   C    L+  R +  V     PH   +LR P
Sbjct: 16  WPTIGFPWIGIPHRQLISCKVIVISPTGEGCPSHSLIGDRPKQTVSRGRNPHR--SLRSP 73

Query: 400 TPHLVFREAAPRADADGGGHTDGPAR 477
            P L+  +  P       GH   P+R
Sbjct: 74  NPRLLMVQEEPNITTPDAGHPSPPSR 99


>07_03_1363 - 26022333-26023225,26023319-26023451
          Length = 341

 Score = 27.9 bits (59), Expect = 8.5
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = -1

Query: 336 NSSATATCGYSALANTIFSMTRSRPLDGWSRISEPGSSERRCSYGIQCP 190
           ++S  + C  S+    + +   SR LDGW+R    G   R    G   P
Sbjct: 211 STSGASQCSPSSAGYVLTTENISRMLDGWARKKGGGGGRRAAGSGPATP 259


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,835,228
Number of Sequences: 37544
Number of extensions: 418174
Number of successful extensions: 1241
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1230
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1851002996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)