Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0436
         (714 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical ...    43   2e-04
Z81068-12|CAJ30227.1|  558|Caenorhabditis elegans Hypothetical p...    29   2.5  
Z81068-4|CAE54896.1|  531|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z81068-3|CAB02983.1|  600|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z81068-2|CAB02984.1|  562|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z69385-1|CAA93424.2|  515|Caenorhabditis elegans Hypothetical pr...    29   3.3  
AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical...    28   5.8  

>AC024758-3|AAF59456.3| 1037|Caenorhabditis elegans Hypothetical
           protein Y37E11AM.1 protein.
          Length = 1037

 Score = 43.2 bits (97), Expect = 2e-04
 Identities = 25/55 (45%), Positives = 33/55 (60%)
 Frame = +1

Query: 511 HQLLCYLSLLETTKPYIVNSMRMPAAQTLLLLAHSIDTNIGFTRIVCDSWLLLEF 675
           HQ+  Y  LLETTKPYI N M +PA  T LL+A  I     ++++  D +L L F
Sbjct: 802 HQIPFYGLLLETTKPYICNVMPVPAVYT-LLVAQKIVIEDDWSQLSIDDFLELRF 855



 Score = 36.3 bits (80), Expect = 0.022
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 278 MLKIVLARALYPQVAVADEFNYCKSVAEQLYHTWSKPFVFLHPTS 412
           ++++++A  LYP  ++ D  N      E   HT  KPF  +HP S
Sbjct: 735 VVRVIIAAGLYPNFSILDPVNKYGYGQEMFTHTRLKPFTQIHPNS 779


>Z81068-12|CAJ30227.1|  558|Caenorhabditis elegans Hypothetical
           protein F25H5.3d protein.
          Length = 558

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +2

Query: 206 YEQRRSEDPGSDIRLQPSSGRDLVMLKIVLARALYPQVAVADEFNYCKSVAEQLYH 373
           ++ R +   GSD+      G D VML    A+  YP  A+      CK     +YH
Sbjct: 363 HKPRPTRAEGSDVANAVLDGADCVMLSGETAKGEYPVDALKIMHYICKEAEAAVYH 418


>Z81068-4|CAE54896.1|  531|Caenorhabditis elegans Hypothetical
           protein F25H5.3c protein.
          Length = 531

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +2

Query: 206 YEQRRSEDPGSDIRLQPSSGRDLVMLKIVLARALYPQVAVADEFNYCKSVAEQLYH 373
           ++ R +   GSD+      G D VML    A+  YP  A+      CK     +YH
Sbjct: 336 HKPRPTRAEGSDVANAVLDGADCVMLSGETAKGEYPVDALKIMHYICKEAEAAVYH 391


>Z81068-3|CAB02983.1|  600|Caenorhabditis elegans Hypothetical
           protein F25H5.3b protein.
          Length = 600

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +2

Query: 206 YEQRRSEDPGSDIRLQPSSGRDLVMLKIVLARALYPQVAVADEFNYCKSVAEQLYH 373
           ++ R +   GSD+      G D VML    A+  YP  A+      CK     +YH
Sbjct: 405 HKPRPTRAEGSDVANAVLDGADCVMLSGETAKGEYPVDALKIMHYICKEAEAAVYH 460


>Z81068-2|CAB02984.1|  562|Caenorhabditis elegans Hypothetical
           protein F25H5.3a protein.
          Length = 562

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 17/56 (30%), Positives = 24/56 (42%)
 Frame = +2

Query: 206 YEQRRSEDPGSDIRLQPSSGRDLVMLKIVLARALYPQVAVADEFNYCKSVAEQLYH 373
           ++ R +   GSD+      G D VML    A+  YP  A+      CK     +YH
Sbjct: 367 HKPRPTRAEGSDVANAVLDGADCVMLSGETAKGEYPVDALKIMHYICKEAEAAVYH 422


>Z69385-1|CAA93424.2|  515|Caenorhabditis elegans Hypothetical
           protein ZK593.1 protein.
          Length = 515

 Score = 29.1 bits (62), Expect = 3.3
 Identities = 18/56 (32%), Positives = 23/56 (41%)
 Frame = +2

Query: 236 SDIRLQPSSGRDLVMLKIVLARALYPQVAVADEFNYCKSVAEQLYHTWSKPFVFLH 403
           SD+      G D VML    A+  YP  A+A   N CK      +H      + LH
Sbjct: 330 SDVANAVLDGVDCVMLSGETAKGDYPVEALAIMHNICKEAESAFFHMKHFEELILH 385


>AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical
           protein Y47G6A.29 protein.
          Length = 2460

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 10/21 (47%), Positives = 13/21 (61%)
 Frame = +3

Query: 375 LGVSPSCSYTPPRISGSSPAC 437
           +GVSP+C+Y      GS P C
Sbjct: 793 VGVSPACAYLDKSSQGSGPGC 813


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,200,596
Number of Sequences: 27780
Number of extensions: 334556
Number of successful extensions: 945
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)