Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0435
         (758 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...   114   8e-28
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    25   0.66 
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    23   3.5  
AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    22   4.6  
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    22   4.6  
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    22   6.1  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score =  114 bits (274), Expect = 8e-28
 Identities = 57/90 (63%), Positives = 67/90 (74%), Gaps = 1/90 (1%)
 Frame = +3

Query: 255 DRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTG 434
           DR Q ERE AL  F+TG   +LVAT VAARGLDI  V+HVIN+DLP  ++EYVHRIGRTG
Sbjct: 442 DRYQSEREKALLDFKTGHRKVLVATGVAARGLDIKDVQHVINYDLPKSIDEYVHRIGRTG 501

Query: 435 RMGNLGVATSFFN-DTNRGLARDLVDCSSR 521
           R+GN G ATSFF+ D +R LA DL    S+
Sbjct: 502 RVGNKGKATSFFDEDQDRNLASDLAKILSQ 531



 Score = 38.3 bits (85), Expect = 7e-05
 Identities = 27/64 (42%), Positives = 35/64 (54%)
 Frame = +2

Query: 2   LYNYVFLAVGRVGSTSENITQKVVWVDEMDKRSFXXXXXXXXXXXQRARPEEDQLILVFV 181
           L NY+F+AVG VGS   ++ QK   V + DKRS            ++A P E  LI  FV
Sbjct: 366 LLNYIFIAVGIVGSACTDVEQKFFQVSKFDKRS------KLVSILEKA-PNERTLI--FV 416

Query: 182 ETKK 193
           ETK+
Sbjct: 417 ETKR 420



 Score = 24.6 bits (51), Expect = 0.87
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +2

Query: 506 RLLVEAKQDVPNWLTS 553
           ++L +AKQ++P WL S
Sbjct: 527 KILSQAKQEIPEWLGS 542


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.66
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +1

Query: 109 GFTKCIKLATTCTSRRGSTYTCVCG 183
           G+T  + LA   TS   S YTC+ G
Sbjct: 225 GWTLILILAKCITSSLSSLYTCIAG 249


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -2

Query: 226 GNINILLVDPHLLSFHKHKYK 164
           G + +L+ D +L  +HK KY+
Sbjct: 15  GFLFLLICDSYLKIYHKEKYR 35


>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 369 HVINFDLPSDVEEYVHRI 422
           H   FD+P+ V EYV  I
Sbjct: 158 HTYIFDVPNFVNEYVQAI 175


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 11/39 (28%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
 Frame = +3

Query: 345 GLDIPHVRHVINFDLPSDVEEYVH-RIGRTGRMGNLGVA 458
           G+ +  +R      +P+D EE+VH  + + G + +  VA
Sbjct: 310 GMIVEMMRKTETPGMPNDFEEFVHPTVAKRGSITSKNVA 348


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
          protein protein.
          Length = 372

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +1

Query: 1  LIQLCVPCCWTCRLNV 48
          LI L V CCW   L++
Sbjct: 6  LIYLIVACCWGKSLSI 21


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,786
Number of Sequences: 336
Number of extensions: 3034
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)