Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0435
(758 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.) 143 2e-34
SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.) 116 2e-26
SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36) 92 4e-19
SB_43842| Best HMM Match : RNB (HMM E-Value=0) 87 1e-17
SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.) 86 3e-17
SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 8e-17
SB_37351| Best HMM Match : DEAD (HMM E-Value=0) 79 4e-15
SB_9558| Best HMM Match : DEAD (HMM E-Value=0) 79 5e-15
SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40) 71 1e-12
SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 1e-12
SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 71 1e-12
SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19) 71 1e-12
SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38) 68 1e-11
SB_17563| Best HMM Match : DEAD (HMM E-Value=0) 66 2e-11
SB_2247| Best HMM Match : DEAD (HMM E-Value=0) 66 2e-11
SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31) 65 5e-11
SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27) 64 9e-11
SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27) 63 2e-10
SB_32980| Best HMM Match : DEAD (HMM E-Value=0) 63 2e-10
SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11) 62 5e-10
SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.) 62 6e-10
SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22) 60 1e-09
SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 2e-09
SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20) 59 4e-09
SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41) 58 8e-09
SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017) 58 1e-08
SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017) 58 1e-08
SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17) 57 1e-08
SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.) 51 1e-06
SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18) 49 5e-06
SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24) 49 5e-06
SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21) 46 3e-05
SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 4e-05
SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19) 46 4e-05
SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05) 42 7e-04
SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27) 40 0.002
SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.009
SB_59278| Best HMM Match : Helicase_C (HMM E-Value=0.00034) 37 0.020
SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23) 36 0.047
SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.082
SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32) 33 0.19
SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42) 33 0.25
SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10) 33 0.33
SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11) 31 0.77
SB_41068| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_32823| Best HMM Match : Late_protein_L1 (HMM E-Value=2.5) 29 5.4
SB_43422| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_1215| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.4
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.2
SB_37504| Best HMM Match : PIP5K (HMM E-Value=0) 28 9.5
SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.5
>SB_30826| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1375
Score = 143 bits (346), Expect = 2e-34
Identities = 64/85 (75%), Positives = 78/85 (91%)
Frame = +3
Query: 255 DRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTG 434
DR+QRERE+ALR FR G TPILVATAVAARGLDIP+V+HVINFDLP+D+EEYVHRIGRTG
Sbjct: 1133 DRSQREREEALRTFRCGDTPILVATAVAARGLDIPNVKHVINFDLPTDIEEYVHRIGRTG 1192
Query: 435 RMGNLGVATSFFNDTNRGLARDLVD 509
R+G+ G+ATSFFN N+ +A++L+D
Sbjct: 1193 RVGHTGLATSFFNHKNKNVAKELMD 1217
Score = 72.9 bits (171), Expect = 3e-13
Identities = 41/64 (64%), Positives = 45/64 (70%)
Frame = +2
Query: 2 LYNYVFLAVGRVGSTSENITQKVVWVDEMDKRSFXXXXXXXXXXXQRARPEEDQLILVFV 181
L NY+FLAVG+VGSTSENITQKVVWVDE DKRSF + P+ QL LVFV
Sbjct: 1056 LENYIFLAVGKVGSTSENITQKVVWVDEFDKRSF------LLDLLNASGPQ--QLTLVFV 1107
Query: 182 ETKK 193
ETKK
Sbjct: 1108 ETKK 1111
Score = 29.9 bits (64), Expect = 2.3
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 190 EGADQLEEYLYSQGYPVTSIHG 255
+GAD LE +L GY TSIHG
Sbjct: 1111 KGADALEMFLAKDGYYCTSIHG 1132
Score = 29.5 bits (63), Expect = 3.1
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 509 LLVEAKQDVPNWLTSTAADXXXXXXXXXXXXXXXNARYGGSG--FGSRDFR 655
+L E+KQ++P+WL S A + R+GG G F SRD+R
Sbjct: 1218 ILEESKQEIPSWLESMAYE-------ASSGSRNRGRRHGGGGGAFSSRDYR 1261
>SB_25090| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1170
Score = 116 bits (280), Expect = 2e-26
Identities = 58/93 (62%), Positives = 71/93 (76%), Gaps = 1/93 (1%)
Frame = +3
Query: 255 DRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTG 434
DR Q+ERE+AL FR G+ P+L+AT VAARGLDI V+HVINFDLPSD++EYVHRIGRTG
Sbjct: 995 DRLQQEREEALDDFRKGRCPVLIATNVAARGLDIDDVKHVINFDLPSDIDEYVHRIGRTG 1054
Query: 435 RMGNLGVATSFF-NDTNRGLARDLVDCSSRLNK 530
R+GN G AT+FF + +AR LV S N+
Sbjct: 1055 RIGNKGKATTFFLRGRDDKVARGLVKVLSEANQ 1087
Score = 35.9 bits (79), Expect = 0.036
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +2
Query: 2 LYNYVFLAVGRVGSTSENITQKVVWVDEMDKR 97
L +Y+FL VGRVG T+ +I Q V+ V + +KR
Sbjct: 919 LNDYLFLTVGRVGGTTSDIEQTVIEVTDNEKR 950
>SB_45898| Best HMM Match : DEAD (HMM E-Value=1.3e-36)
Length = 428
Score = 92.3 bits (219), Expect = 4e-19
Identities = 43/82 (52%), Positives = 54/82 (65%)
Frame = +3
Query: 258 RNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGR 437
RNQ +RE AL + G ILVAT VA RG+DI V HVIN+D+ +E+Y HRIGRTGR
Sbjct: 318 RNQEQREFALSSLKGGSKDILVATDVAGRGIDIKDVSHVINYDMAKTIEDYTHRIGRTGR 377
Query: 438 MGNLGVATSFFNDTNRGLARDL 503
G G+A SF ++ G+ DL
Sbjct: 378 AGKTGIAVSFLTQSDSGVFYDL 399
>SB_43842| Best HMM Match : RNB (HMM E-Value=0)
Length = 1238
Score = 87.4 bits (207), Expect = 1e-17
Identities = 40/71 (56%), Positives = 52/71 (73%)
Frame = +3
Query: 255 DRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTG 434
++ Q R ++ FR G+ ILVAT VA+RGLD P V HVIN+DLP +E Y+HR GRTG
Sbjct: 365 EKPQDYRFKLVKAFRDGKVDILVATDVASRGLDFPEVTHVINYDLPDTIECYIHRCGRTG 424
Query: 435 RMGNLGVATSF 467
R+G+ G+ATSF
Sbjct: 425 RIGHHGIATSF 435
>SB_52411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 370
Score = 86.2 bits (204), Expect = 3e-17
Identities = 40/83 (48%), Positives = 57/83 (68%)
Frame = +3
Query: 255 DRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTG 434
D Q+ERE ++ FR GQ+ +L++T V ARGLD+ V VIN+DLP++ E Y+HRIGR+G
Sbjct: 269 DMPQKEREAIMKDFRAGQSRVLISTDVWARGLDVQQVSLVINYDLPNNRELYIHRIGRSG 328
Query: 435 RMGNLGVATSFFNDTNRGLARDL 503
R G GVA +F + + RD+
Sbjct: 329 RFGRKGVAINFVKSDDIRILRDI 351
>SB_29417| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 84.6 bits (200), Expect = 8e-17
Identities = 40/89 (44%), Positives = 57/89 (64%)
Frame = +3
Query: 264 QREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRMG 443
Q +RE AL F+TG IL+AT VA+RGLDI + +VIN+D P +E+YVHR+GRTGR G
Sbjct: 78 QYDREQALDDFKTGLARILIATDVASRGLDIKDITYVINYDFPRHIEDYVHRVGRTGRAG 137
Query: 444 NLGVATSFFNDTNRGLARDLVDCSSRLNK 530
G + +F + + A L+ + N+
Sbjct: 138 RSGTSLTFISREDWRSAHKLIKIMVQANQ 166
>SB_37351| Best HMM Match : DEAD (HMM E-Value=0)
Length = 688
Score = 79.0 bits (186), Expect = 4e-15
Identities = 38/79 (48%), Positives = 49/79 (62%)
Frame = +3
Query: 255 DRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTG 434
D Q++RE L+ FR G+ LVAT VAARGLDIP + V+ + P DV+ Y+HR GRTG
Sbjct: 337 DIPQKQREVTLKSFREGKFRCLVATDVAARGLDIPEIDLVVQCEPPKDVDAYIHRSGRTG 396
Query: 435 RMGNLGVATSFFNDTNRGL 491
R G G+ F+ GL
Sbjct: 397 RAGREGICIVFYKPQQEGL 415
>SB_9558| Best HMM Match : DEAD (HMM E-Value=0)
Length = 436
Score = 78.6 bits (185), Expect = 5e-15
Identities = 37/68 (54%), Positives = 50/68 (73%)
Frame = +3
Query: 261 NQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRM 440
+Q ER AL RF++G ILVAT VA+RGLDIP V V+N ++P+D ++Y+HR+GRT R
Sbjct: 282 SQGERLAALARFKSGTIKILVATDVASRGLDIPQVELVVNSNIPADPKDYIHRVGRTARA 341
Query: 441 GNLGVATS 464
G G+A S
Sbjct: 342 GRGGMAIS 349
>SB_57459| Best HMM Match : DEAD (HMM E-Value=1.50001e-40)
Length = 490
Score = 70.9 bits (166), Expect = 1e-12
Identities = 34/74 (45%), Positives = 48/74 (64%), Gaps = 6/74 (8%)
Frame = +3
Query: 270 EREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLP------SDVEEYVHRIGRT 431
+R L RFR G+ +L+ T V+ARG+D+ V VIN+D+P +D E Y+HRIGRT
Sbjct: 382 QRIAVLERFRLGKEKLLITTNVSARGIDVEQVTLVINYDMPMDMQGKADFETYLHRIGRT 441
Query: 432 GRMGNLGVATSFFN 473
GR G G+A +F +
Sbjct: 442 GRFGKSGIAVNFID 455
>SB_18655| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 697
Score = 70.9 bits (166), Expect = 1e-12
Identities = 33/65 (50%), Positives = 45/65 (69%)
Frame = +3
Query: 264 QREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRMG 443
QR+R L RF+ T +L+AT VAARGLDI ++ HVI++ +P D E YVHR GRT R
Sbjct: 492 QRQRLKNLDRFKASNTGLLLATDVAARGLDIANIEHVIHYQVPKDPEVYVHRSGRTARAS 551
Query: 444 NLGVA 458
+ G++
Sbjct: 552 HEGLS 556
>SB_59075| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 445
Score = 70.5 bits (165), Expect = 1e-12
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = +3
Query: 255 DRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGR 428
D++Q ER A+R F G +LVAT VA++GLD P ++HVINFD+P D+E YV G+
Sbjct: 120 DKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINFDMPEDIENYVLLCGQ 177
>SB_55073| Best HMM Match : Helicase_C (HMM E-Value=1.3e-19)
Length = 212
Score = 70.5 bits (165), Expect = 1e-12
Identities = 30/58 (51%), Positives = 41/58 (70%)
Frame = +3
Query: 255 DRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGR 428
D++Q ER A+R F G +LVAT VA++GLD P ++HVINFD+P D+E YV G+
Sbjct: 120 DKSQEERVHAIREFHQGNKDVLVATDVASKGLDFPDIQHVINFDMPEDIENYVLLCGQ 177
>SB_48046| Best HMM Match : DEAD (HMM E-Value=4e-38)
Length = 475
Score = 67.7 bits (158), Expect = 1e-11
Identities = 32/97 (32%), Positives = 52/97 (53%)
Frame = +3
Query: 186 LRRCGSTRRIFIFPRLPGNIDPWDRNQREREDALRRFRTGQTPILVATAVAARGLDIPHV 365
++RC + + + P Q ER ++F+ + +LVAT + RG+DI V
Sbjct: 345 VQRCTALSHLLLKQNFPAICIHRGMKQEERLARYQQFKNFEKRMLVATNLFGRGMDIERV 404
Query: 366 RHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFND 476
V N+D+P D + Y+HR+ R GR G G+A +F +D
Sbjct: 405 NIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSD 441
>SB_17563| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/75 (44%), Positives = 43/75 (57%)
Frame = +3
Query: 261 NQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRM 440
+Q R FR G LV + + RG+DI V VINFD P + E Y+HRIGR+GR
Sbjct: 326 SQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRF 385
Query: 441 GNLGVATSFFNDTNR 485
G+LGVA + +R
Sbjct: 386 GHLGVAINLITYDDR 400
>SB_2247| Best HMM Match : DEAD (HMM E-Value=0)
Length = 439
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/75 (44%), Positives = 43/75 (57%)
Frame = +3
Query: 261 NQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRM 440
+Q R FR G LV + + RG+DI V VINFD P + E Y+HRIGR+GR
Sbjct: 326 SQSHRNRVFHDFRQGHCRNLVCSDLFTRGIDIQSVNVVINFDFPKNSETYLHRIGRSGRF 385
Query: 441 GNLGVATSFFNDTNR 485
G+LGVA + +R
Sbjct: 386 GHLGVAINLITYDDR 400
>SB_34731| Best HMM Match : DEAD (HMM E-Value=3.8e-31)
Length = 978
Score = 65.3 bits (152), Expect = 5e-11
Identities = 28/61 (45%), Positives = 41/61 (67%)
Frame = +3
Query: 267 REREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRMGN 446
R R + +F+ ILV T +A+RGLD V HVINFD P+ + +Y+HR+GRTGR+ +
Sbjct: 733 RIRCERFEKFQNKTADILVCTDIASRGLDTSDVSHVINFDFPNSMVDYIHRVGRTGRVSH 792
Query: 447 L 449
+
Sbjct: 793 V 793
>SB_41683| Best HMM Match : DEAD (HMM E-Value=1.5e-27)
Length = 559
Score = 64.5 bits (150), Expect = 9e-11
Identities = 30/60 (50%), Positives = 37/60 (61%)
Frame = +3
Query: 285 LRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRMGNLGVATS 464
LR FRTGQ +LV T RGLD + HV ++P +VEEY+H GR GR G G AT+
Sbjct: 471 LRDFRTGQIQLLVGTEETVRGLDFKELDHVYLMEVPKNVEEYLHLCGRVGRQGRPGTATT 530
>SB_37956| Best HMM Match : Helicase_C (HMM E-Value=1.5e-27)
Length = 331
Score = 63.3 bits (147), Expect = 2e-10
Identities = 34/73 (46%), Positives = 43/73 (58%)
Frame = +3
Query: 261 NQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRM 440
N+ + D+ R+ +G ILV T V ARG+DIP V VI +D PS +VHR GRT R+
Sbjct: 128 NRHKIFDSFRKLESG---ILVCTDVMARGVDIPEVNWVIQYDPPSSANAFVHRCGRTARI 184
Query: 441 GNLGVATSFFNDT 479
GN G A F T
Sbjct: 185 GNEGNAVVFLLPT 197
>SB_32980| Best HMM Match : DEAD (HMM E-Value=0)
Length = 985
Score = 63.3 bits (147), Expect = 2e-10
Identities = 27/70 (38%), Positives = 46/70 (65%)
Frame = +3
Query: 258 RNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGR 437
+ Q +R +A+ + ++ IL++T + ARG+D +V V+N D+P + E Y+HRIGR GR
Sbjct: 248 QTQAKRLEAMEKLKSFHCRILISTDLTARGIDAENVNLVVNMDVPHNGETYLHRIGRAGR 307
Query: 438 MGNLGVATSF 467
G G+A ++
Sbjct: 308 FGTEGMAVTY 317
>SB_21307| Best HMM Match : Helicase_C (HMM E-Value=1.7e-11)
Length = 87
Score = 62.1 bits (144), Expect = 5e-10
Identities = 26/63 (41%), Positives = 41/63 (65%)
Frame = +3
Query: 288 RRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSF 467
++F+ + +LVAT + RG+DI V V N+D+P D + Y+HR+ R GR G G+A +F
Sbjct: 6 QQFKNFEKRMLVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGRFGTKGLAITF 65
Query: 468 FND 476
+D
Sbjct: 66 VSD 68
>SB_56998| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 478
Score = 61.7 bits (143), Expect = 6e-10
Identities = 25/55 (45%), Positives = 40/55 (72%)
Frame = +3
Query: 255 DRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHR 419
D +Q+ER+ ++ FR+G + +L+ T + ARG+D+ V VIN+DLPS+ E Y+HR
Sbjct: 363 DMSQKERDIIMKEFRSGSSRVLITTDLLARGIDVHQVSLVINYDLPSNRENYIHR 417
>SB_46680| Best HMM Match : Helicase_C (HMM E-Value=3.8e-22)
Length = 1058
Score = 60.5 bits (140), Expect = 1e-09
Identities = 25/57 (43%), Positives = 38/57 (66%)
Frame = +3
Query: 255 DRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIG 425
DR Q +R++ ++ FRTG+ +L+AT + RG+D V VIN+D P+ Y+HRIG
Sbjct: 416 DRTQAQRDNIVKSFRTGKIWVLIATELMGRGIDFKGVNLVINYDFPTSAVAYIHRIG 472
>SB_4445| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/68 (42%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Frame = +3
Query: 336 AARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVDCS 515
A+RGLDIP+V HVI D +D + +HR+GRT R G+ G +F + L L C
Sbjct: 108 ASRGLDIPNVTHVIQLDFATDAAQMLHRVGRTARAGSHGKVVNFITKDDEELVNALRACD 167
Query: 516 SRLN-KTY 536
+ N KTY
Sbjct: 168 NNSNEKTY 175
>SB_38262| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/68 (42%), Positives = 42/68 (61%)
Frame = +3
Query: 261 NQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRM 440
+Q R + +F+ +T ++V T VAARG+DIP + +VINF P + +VHR+GR R
Sbjct: 510 DQTARTINVGKFQHKKTMVMVVTDVAARGIDIPMLDNVINFHFPPKAKLFVHRVGRVARA 569
Query: 441 GNLGVATS 464
G G A S
Sbjct: 570 GRSGTAYS 577
>SB_30394| Best HMM Match : Helicase_C (HMM E-Value=1e-20)
Length = 556
Score = 58.8 bits (136), Expect = 4e-09
Identities = 26/52 (50%), Positives = 35/52 (67%)
Frame = +3
Query: 315 ILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFF 470
++VAT G+DIP V H+I+F +PS+VE YV IGR GR G L AT ++
Sbjct: 314 VVVATCALGMGVDIPDVDHIIHFGIPSEVEHYVQEIGRGGRDGRLCYATLYY 365
>SB_11691| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1448
Score = 58.4 bits (135), Expect = 6e-09
Identities = 26/60 (43%), Positives = 38/60 (63%)
Frame = +3
Query: 258 RNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGR 437
+ Q++R F ++ IL+ T VAARGLDIP V ++ +D D +EY+HR+GRT R
Sbjct: 852 QKQQKRTTTFFEFCNAKSGILLCTDVAARGLDIPEVDWIVQYDPADDPKEYIHRVGRTAR 911
>SB_18993| Best HMM Match : DEAD (HMM E-Value=9.3e-41)
Length = 690
Score = 58.0 bits (134), Expect = 8e-09
Identities = 36/102 (35%), Positives = 49/102 (48%)
Frame = +3
Query: 201 STRRIFIFPRLPGNIDPWDRNQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVIN 380
S+ + IF D R R ++R R + V VA DI ++ VIN
Sbjct: 305 SSLQTLIFTETKRRADELTRKLRSDGCGIQRPRYVSVDMAVVIMVA----DISDIKFVIN 360
Query: 381 FDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLV 506
FD P+ E+YVHRIGRT R G + +FF N A++LV
Sbjct: 361 FDFPNCTEDYVHRIGRTARSDRTGTSYTFFTVNNAKQAKELV 402
>SB_58021| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +3
Query: 342 RGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNR 485
RG+DI V VINFD P + E Y+HRIGR+GR G+LGVA + +R
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDDR 52
>SB_24297| Best HMM Match : Helicase_C (HMM E-Value=0.017)
Length = 91
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/48 (54%), Positives = 33/48 (68%)
Frame = +3
Query: 342 RGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNR 485
RG+DI V VINFD P + E Y+HRIGR+GR G+LGVA + +R
Sbjct: 5 RGIDIQSVNVVINFDFPKNSETYLHRIGRSGRFGHLGVAINLITYDDR 52
>SB_14524| Best HMM Match : DEAD (HMM E-Value=3.7e-17)
Length = 500
Score = 57.2 bits (132), Expect = 1e-08
Identities = 25/49 (51%), Positives = 34/49 (69%)
Frame = +3
Query: 363 VRHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVD 509
V VINFD+P EEYVH+IGR GR+G G + SF N+ ++GL L++
Sbjct: 397 VSKVINFDMPPTYEEYVHQIGRAGRLGATGWSISFINNASKGLFLQLIN 445
>SB_36976| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 117
Score = 50.8 bits (116), Expect = 1e-06
Identities = 22/42 (52%), Positives = 30/42 (71%)
Frame = +3
Query: 345 GLDIPHVRHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSFF 470
G+DIP V H+I++ +PS+VE YV IGR GR G L AT ++
Sbjct: 2 GVDIPDVDHIIHYGIPSEVEHYVQEIGRGGRDGRLCHATLYY 43
>SB_8614| Best HMM Match : Helicase_C (HMM E-Value=1.6e-18)
Length = 282
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/53 (41%), Positives = 30/53 (56%)
Frame = +3
Query: 270 EREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGR 428
++E L+ FR Q +LVAT+V GLD+P V+ FD P + YV GR
Sbjct: 132 KQEKVLKMFRKHQINLLVATSVVEEGLDVPKCNFVVRFDFPQNFRSYVQSKGR 184
>SB_5719| Best HMM Match : Helicase_C (HMM E-Value=1e-24)
Length = 1366
Score = 48.8 bits (111), Expect = 5e-06
Identities = 22/58 (37%), Positives = 32/58 (55%)
Frame = +3
Query: 270 EREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRMG 443
+R +RF +G+ + AT GLD VR +I++++P E YV IGR GR G
Sbjct: 826 QRRKVQKRFMSGELRAVAATVAFGMGLDKSDVRAIIHYNMPKSFESYVQEIGRAGRDG 883
>SB_20654| Best HMM Match : Helicase_C (HMM E-Value=2.3e-21)
Length = 1728
Score = 46.4 bits (105), Expect = 3e-05
Identities = 24/59 (40%), Positives = 34/59 (57%)
Frame = +3
Query: 261 NQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGR 437
+Q+E+ + + RFR G LV+T V GLDI V ++ FD + V R+GRTGR
Sbjct: 565 SQKEQLEVVHRFRMGGYNTLVSTCVGEEGLDIGDVDLIVCFDAHASPIRLVQRMGRTGR 623
>SB_21060| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 45.6 bits (103), Expect = 4e-05
Identities = 32/93 (34%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Frame = +3
Query: 228 RLPGNIDP-WDRNQREREDALRRFRTG-QTPILVATAVAARGLDIPHVRHVINFDLPSDV 401
RL GN D QRE+E+ + +FR G + I++AT VA GLDI +VI +D+ +
Sbjct: 588 RLVGNSDGRGGMTQREQEEVIAKFRAGSECNIIIATTVAEEGLDIDDCSYVIRYDMMGNE 647
Query: 402 EEYVHRIGRTGRMGNLGVATSFFNDTNRGLARD 500
V GR R G + T+ L R+
Sbjct: 648 ISSVQSRGRV-RTKTGGQYSVVVGQTSGALVRE 679
>SB_56809| Best HMM Match : DEAD (HMM E-Value=2.6e-19)
Length = 1463
Score = 45.6 bits (103), Expect = 4e-05
Identities = 21/56 (37%), Positives = 33/56 (58%)
Frame = +3
Query: 270 EREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGR 437
E+E L+ FRTG+ +L++T+V GLD+P V+ FD +++ V GR R
Sbjct: 605 EQEVILKSFRTGRIKLLISTSVLEEGLDVPVCNLVVRFDSTMNLKSLVQSRGRASR 660
>SB_35369| Best HMM Match : Helicase_C (HMM E-Value=6.1e-05)
Length = 584
Score = 41.5 bits (93), Expect = 7e-04
Identities = 21/47 (44%), Positives = 32/47 (68%)
Frame = +3
Query: 264 QREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVE 404
Q +R +AL++F+ G+ ILVAT +AARGLDI V++ + L + E
Sbjct: 44 QLQRLEALQKFKNGEVDILVATDLAARGLDITGVKNSKSVTLVGEKE 90
>SB_14271| Best HMM Match : Pkinase (HMM E-Value=2.1e-27)
Length = 2056
Score = 40.3 bits (90), Expect = 0.002
Identities = 19/71 (26%), Positives = 34/71 (47%)
Frame = +3
Query: 264 QREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRMG 443
+ E+ + +++F++ L+AT G HV V + P + +V GR GR G
Sbjct: 1079 ENEKIEVIKKFQSKDAQFLIATEAYQVGTHDDHVNLVCHVGCPRTLTSWVQEFGRGGRAG 1138
Query: 444 NLGVATSFFND 476
N A ++N+
Sbjct: 1139 NNAKAIIYYNE 1149
>SB_47844| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 399
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/52 (36%), Positives = 27/52 (51%)
Frame = +3
Query: 303 GQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRMGNLGVA 458
G +L+AT G+D V+ VI++ VE Y+ GR GR G+ VA
Sbjct: 345 GTVRLLIATIAFGMGVDCKGVKRVIHYGPSKSVEAYIQETGRAGRDGSNSVA 396
>SB_19958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 797
Score = 37.9 bits (84), Expect = 0.009
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +2
Query: 8 NYVFLAVGRVGSTSENITQKVVWVDEMDKR 97
+Y+FLAVGRVG T+ +ITQ V+ V+ +KR
Sbjct: 686 DYLFLAVGRVGGTNLDITQHVITVNGSEKR 715
>SB_36536| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1258
Score = 37.9 bits (84), Expect = 0.009
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +3
Query: 261 NQREREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFD 386
+Q+E+E + F+ G IL+AT+VA GLDI VI +D
Sbjct: 983 SQQEQELIIEEFKKGVVNILIATSVAEEGLDIKDCSFVIRYD 1024
>SB_59278| Best HMM Match : Helicase_C (HMM E-Value=0.00034)
Length = 144
Score = 36.7 bits (81), Expect = 0.020
Identities = 18/51 (35%), Positives = 26/51 (50%)
Frame = +3
Query: 315 ILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGRMGNLGVATSF 467
++ AT G+D +VR V+ +P VE Y GR GR G+ V T +
Sbjct: 80 VMCATKAFGLGIDQKNVRFVVPHIMPECVEHYYEEAGRAGRDGDPAVCTLY 130
>SB_23184| Best HMM Match : Helicase_C (HMM E-Value=7.8e-23)
Length = 226
Score = 35.5 bits (78), Expect = 0.047
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Frame = +3
Query: 270 EREDALRRFRTGQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRI-GRTGRMGN 446
E++ + RF G++ +L++T V G+D+P+ ++ D +H++ GR GR GN
Sbjct: 106 EKDLVMDRFIKGESQVLISTTVIEVGVDVPNATMMVIMDADRFGVSQLHQLRGRIGR-GN 164
Query: 447 L 449
L
Sbjct: 165 L 165
>SB_49443| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 495
Score = 34.7 bits (76), Expect = 0.082
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = +3
Query: 267 REREDA-LRRFRT--GQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGR 437
+E +DA L F+ G +LVAT G+D V I+F + E ++ GR GR
Sbjct: 212 KENKDAILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTIHFGPSKNCEAFIQETGRAGR 271
>SB_28817| Best HMM Match : DEAD (HMM E-Value=3.4e-32)
Length = 651
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +3
Query: 306 QTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGR 437
++ ++VAT G+D +VR VI+ +E Y GR GR
Sbjct: 352 RSQVVVATVAFGMGIDKSNVRFVIHHSFSKSMENYYQESGRAGR 395
>SB_44408| Best HMM Match : DEAD (HMM E-Value=6.8005e-42)
Length = 238
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/32 (40%), Positives = 21/32 (65%)
Frame = +3
Query: 372 VINFDLPSDVEEYVHRIGRTGRMGNLGVATSF 467
++N D + E+Y+HR+GRT R G G + +F
Sbjct: 119 ILNMDF--EKEDYIHRVGRTARAGRSGRSVTF 148
>SB_1038| Best HMM Match : Helicase_C (HMM E-Value=1.1e-10)
Length = 435
Score = 32.7 bits (71), Expect = 0.33
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +3
Query: 267 REREDA-LRRFRT--GQTPILVATAVAARGLDIPHVRHVINFDLPSDVEEYVHRIGRTGR 437
+E +DA L F+ G +LVAT G+D V ++F + E ++ G GR
Sbjct: 243 KENKDAILESFKRLDGHVQVLVATIAFGMGIDCKGVHRTMHFGPSKNCEAFIQETGHAGR 302
Query: 438 MG 443
G
Sbjct: 303 DG 304
>SB_45482| Best HMM Match : BTB (HMM E-Value=5.6e-11)
Length = 3037
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Frame = -1
Query: 758 RTTR-HSYHHMSPRHSQSRNRYRQLLQNVPPDEVVYGSPLSRSRYRRNEHS-QNESQCAD 585
RTTR ++ H + +Q + ++ ++ V PD + Y SP+S R+N +S N Q D
Sbjct: 2655 RTTRDYTVHFHQNKSTQEKGKHFKVSGPVAPDTIRYQSPVSPRTPRKNLNSTHNAKQSPD 2714
Query: 584 R 582
+
Sbjct: 2715 Q 2715
>SB_41068| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 28.7 bits (61), Expect = 5.4
Identities = 21/98 (21%), Positives = 44/98 (44%)
Frame = +1
Query: 46 VRKYYTEGCLGRRNGQAFLFIGFTKCIKLATTCTSRRGSTYTCVCGN*EGADQLEEYLYS 225
+R+ GC RR +++ GF++ + TT +++ G+ + + ++
Sbjct: 39 LRQLAKGGCAARR--LSWVTPGFSQSRRCKTTASAKLACLQVDSRGSPSSYNGHQFLVFR 96
Query: 226 QGYPVTSIHGTVTNVNVKMLYDVFELDKHQYLWQQLSL 339
+P + H K LY + KHQ+LW++ +L
Sbjct: 97 TDFPFSK-HKNRFKRRTKYLYVITTSTKHQHLWRRSAL 133
>SB_32823| Best HMM Match : Late_protein_L1 (HMM E-Value=2.5)
Length = 585
Score = 28.7 bits (61), Expect = 5.4
Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Frame = +1
Query: 40 LNVRKYYTEGCLGRRN-GQAFLFIGFTKCIKLATTCTSRRGSTYTC-VCGN*EGADQLEE 213
L+ +Y GCL G ++ + L C+SR GSTYTC C A+
Sbjct: 81 LSTNRYPKSGCLANPALGWYVTWLHWGPDKLLTLHCSSRTGSTYTCSTCPTSPPANTCGS 140
Query: 214 YLYSQGYPVTSIHGTVTNVNVKMLYDVF-ELDKHQYL 321
+S + V +V K+L VF L H+ L
Sbjct: 141 AAWSTTPSSEYLVELVESVQKKVLRIVFPNLSYHEAL 177
>SB_43422| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1472
Score = 28.7 bits (61), Expect = 5.4
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 650 SPLSRSRYRRNEHSQNESQCADRR 579
+PL RYR+ EH E +C D R
Sbjct: 1185 NPLLTFRYRQKEHEDREKRCHDMR 1208
>SB_1215| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1033
Score = 28.7 bits (61), Expect = 5.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +3
Query: 390 PSDVEEYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVD 509
P D+E Y IGR GR G F+ + +R L++
Sbjct: 233 PKDIESYYQEIGRAGRDGEPSSCYVFYKPGDFATSRYLIN 272
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/44 (36%), Positives = 21/44 (47%)
Frame = +3
Query: 405 EYVHRIGRTGRMGNLGVATSFFNDTNRGLARDLVDCSSRLNKTY 536
E HR + G FF++T+ GL RD VD + L TY
Sbjct: 183 EVTHRFTFSRVFGPETTQKDFFDETSLGLVRDFVDGQNCLVFTY 226
>SB_16431| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 790
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = +3
Query: 255 DRNQREREDALRRFRTGQTPILVATAVA 338
D +Q ER L +F+ + PILVAT VA
Sbjct: 762 DMDQFERSKVLGQFKKREIPILVATDVA 789
>SB_29906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2463
Score = 28.3 bits (60), Expect = 7.2
Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Frame = +3
Query: 348 LDIPHVRHVINFDLPSDVEEYVHRIGRTGRMGNLGVATS--FF--NDTNRGLAR 497
LD+P VR + D +HR G G +GNL A S F+ + T+RG +R
Sbjct: 1633 LDVPMVRQQLRSAEMLDAVR-IHRQGEPGHVGNLDCAFSLKFYSQSSTHRGTSR 1685
>SB_37504| Best HMM Match : PIP5K (HMM E-Value=0)
Length = 2119
Score = 27.9 bits (59), Expect = 9.5
Identities = 8/15 (53%), Positives = 15/15 (100%)
Frame = +1
Query: 205 LEEYLYSQGYPVTSI 249
LE+Y+Y++GYP++S+
Sbjct: 444 LEQYVYTEGYPISSL 458
>SB_23095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2722
Score = 27.9 bits (59), Expect = 9.5
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 6/88 (6%)
Frame = +3
Query: 270 EREDALRRFRTGQTPILVATAVAARGLDIPHVRHVIN----FDLPSDVEEYVHRIGRTGR 437
ER+ FR G +LVAT+ G+++P R +I D Y GR GR
Sbjct: 568 ERDIIEGAFRQGTIRVLVATSTLCSGVNLPARRVIIRTPTFHGRMVDPLVYKQMAGRAGR 627
Query: 438 MG--NLGVATSFFNDTNRGLARDLVDCS 515
G LG + + R A L+ S
Sbjct: 628 KGVDALGESLLICKTSERAKATTLMKSS 655
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,336,303
Number of Sequences: 59808
Number of extensions: 373081
Number of successful extensions: 1271
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2070332524
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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