Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0433
         (768 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical p...    31   0.90 
Z82077-2|CAB04940.1|  722|Caenorhabditis elegans Hypothetical pr...    29   3.6  
AC087079-15|ABF71716.1|  152|Caenorhabditis elegans Hypothetical...    29   3.6  
Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical pr...    28   6.4  

>U97193-15|AAB52443.1| 1932|Caenorhabditis elegans Hypothetical
            protein C06A5.1 protein.
          Length = 1932

 Score = 31.1 bits (67), Expect = 0.90
 Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
 Frame = +2

Query: 428  HDSSTYNFIYYVKACLRNHKQFNNLSSLE-NLTIFIY*LTRVTSSGPT*W*VVTRSHRYY 604
            H S    F+ YV  CL+NH Q  N++SL+ +LT   +   ++  S      +V    +Y 
Sbjct: 1056 HTSLCEYFLQYVDTCLKNH-QIKNITSLDTSLTCIEFGNQKIALSNEVPSAIVKLLSKYD 1114

Query: 605  NVNAANQ 625
            N+  A +
Sbjct: 1115 NLQTAEK 1121


>Z82077-2|CAB04940.1|  722|Caenorhabditis elegans Hypothetical
           protein W09C5.5 protein.
          Length = 722

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
 Frame = +1

Query: 559 RTHLMVSGYQKP*ILQRKRRQPTLDMRSNSQLCCITLSQTF---KSEYITASQQN 714
           +T +    Y  P +LQRK    +LDM S   +  +TLS TF   + E I+   QN
Sbjct: 587 KTVVGTPAYLPPEVLQRKGYNKSLDMWSVGVIIYVTLSGTFPFNEGEEISEQIQN 641


>AC087079-15|ABF71716.1|  152|Caenorhabditis elegans Hypothetical
          protein Y37E3.19 protein.
          Length = 152

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 12/19 (63%), Positives = 13/19 (68%)
 Frame = +1

Query: 25 CILFHFIITNMIIAFCTHQ 81
          CI  HFII   +IAFCT Q
Sbjct: 13 CIFTHFIIGATLIAFCTKQ 31


>Z92782-9|CAE17814.1|  329|Caenorhabditis elegans Hypothetical
           protein F14F8.12 protein.
          Length = 329

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 15/41 (36%), Positives = 23/41 (56%)
 Frame = +3

Query: 216 YVLIFIYLFYTIHITILYKTQTKIIY*SQSFNRFFNTFTIH 338
           ++L+FI LFY +H  IL +T   I++    FN     F+ H
Sbjct: 75  FILLFIILFYILH--ILQQTFHVILFLLAVFNSLKYIFSFH 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,421,418
Number of Sequences: 27780
Number of extensions: 299815
Number of successful extensions: 616
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 599
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)