Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0433
         (768 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    23   3.1  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    23   3.1  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    23   3.1  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    23   3.1  
DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    22   5.5  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    22   5.5  
DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex det...    21   9.5  
DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex det...    21   9.5  
AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex det...    21   9.5  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    21   9.5  

>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -1

Query: 102 EHHRNEVLMRTKSNNHICNNKMKQNTKFIN*KKK 1
           E  R   ++ + SNN I NN  K N    N  KK
Sbjct: 74  ERSREPKIISSLSNNTIHNNNYKYNYNNNNYNKK 107


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -1

Query: 102 EHHRNEVLMRTKSNNHICNNKMKQNTKFIN*KKK 1
           E  R   ++ + SNN I NN  K N    N  KK
Sbjct: 74  ERSREPKIISSLSNNTIHNNNYKYNYNNNNYNKK 107


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -1

Query: 102 EHHRNEVLMRTKSNNHICNNKMKQNTKFIN*KKK 1
           E  R   ++ + SNN I NN  K N    N  KK
Sbjct: 74  ERSREPKIISSLSNNTIHNNNYKYNYNNNNYNKK 107


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 13/34 (38%), Positives = 16/34 (47%)
 Frame = -1

Query: 102 EHHRNEVLMRTKSNNHICNNKMKQNTKFIN*KKK 1
           E  R   ++ + SNN I NN  K N    N  KK
Sbjct: 74  ERSREPKIISSLSNNTIHNNNYKYNYNNNNYNKK 107


>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 245 HNPYNNTLQNTNKNYIL 295
           +N YNN  +   KNYI+
Sbjct: 106 NNNYNNNYKKLYKNYII 122


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +2

Query: 245 HNPYNNTLQNTNKNYIL 295
           +N YNN  +   KNYI+
Sbjct: 106 NNNYNNNYKKLYKNYII 122


>DQ325089-1|ABD14103.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 102 EHHRNEVLMRTKSNNHICNNKMKQN 28
           E  R   ++ + SNN I NN  K N
Sbjct: 73  ERSREPKIISSLSNNTIHNNNYKYN 97


>DQ325088-1|ABD14102.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -1

Query: 102 EHHRNEVLMRTKSNNHICNNKMKQN 28
           E  R   ++ + SNN I NN  K N
Sbjct: 73  ERSREPKIISSLSNNTIHNNNYKYN 97


>AY569705-1|AAS86658.1|  419|Apis mellifera complementary sex
           determiner protein.
          Length = 419

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 224 NIYLFILHNPYNNTLQNTNKNY 289
           N Y +  +N YNN   N   NY
Sbjct: 320 NNYKYSNYNNYNNYNNNNYNNY 341



 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = -1

Query: 180 YENFNDYFNFSN 145
           Y N+N+Y N++N
Sbjct: 324 YSNYNNYNNYNN 335


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 245 HNPYNNTLQNTNKNY 289
           +N YNN   N N NY
Sbjct: 334 YNNYNNYNNNYNNNY 348


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,297
Number of Sequences: 438
Number of extensions: 3994
Number of successful extensions: 14
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24032646
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)