Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0432
         (757 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A0LSW2 Cluster: Rod shape-determining protein MreC prec...    35   2.5  
UniRef50_Q8IBL3 Cluster: Putative uncharacterized protein MAL7P1...    34   3.3  
UniRef50_Q9AW33 Cluster: 26S proteasome regulatory subunit; n=1;...    33   7.6  
UniRef50_A7EKU5 Cluster: Predicted protein; n=1; Sclerotinia scl...    33   7.6  

>UniRef50_A0LSW2 Cluster: Rod shape-determining protein MreC
           precursor; n=1; Acidothermus cellulolyticus 11B|Rep: Rod
           shape-determining protein MreC precursor - Acidothermus
           cellulolyticus (strain ATCC 43068 / 11B)
          Length = 323

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 20/60 (33%), Positives = 29/60 (48%)
 Frame = -3

Query: 302 GSLETFTISPGQGSKSLKVRGFKR*FKPPRXXPKNYFLLTSKNVVN*AVTVTPEPIPEHS 123
           G ++T T+ P     +L + G     KPPR  P+   L +    V   VT TP P+P+ S
Sbjct: 247 GEVQTGTVRPFVDFATLDLVGVV--VKPPRTDPRGALLASPVPTVTVTVTATPAPVPQPS 304


>UniRef50_Q8IBL3 Cluster: Putative uncharacterized protein MAL7P1.127;
            n=3; Plasmodium|Rep: Putative uncharacterized protein
            MAL7P1.127 - Plasmodium falciparum (isolate 3D7)
          Length = 1605

 Score = 34.3 bits (75), Expect = 3.3
 Identities = 17/43 (39%), Positives = 29/43 (67%)
 Frame = -1

Query: 736  NNIAISSYNFNNLQVLDHRYYILKYTFKILMKLHNKTRSKHKI 608
            N+I   S+  +N + +  RYY+ +YTFK+ +K  NKT++K+ I
Sbjct: 1440 NHINYISHLISNKKWI--RYYVHRYTFKLYIKKKNKTKNKNFI 1480


>UniRef50_Q9AW33 Cluster: 26S proteasome regulatory subunit; n=1;
           Guillardia theta|Rep: 26S proteasome regulatory subunit
           - Guillardia theta (Cryptomonas phi)
          Length = 693

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 18/37 (48%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
 Frame = +1

Query: 418 LYNNPSDKIK--MM*KVNVKFFDCNKDSLNIVKILIK 522
           LY   SDKIK  ++  +++ FF  N +SLNI KIL+K
Sbjct: 454 LYETNSDKIKFSLLLCLSLVFFGSNNESLNIYKILMK 490


>UniRef50_A7EKU5 Cluster: Predicted protein; n=1; Sclerotinia
           sclerotiorum 1980|Rep: Predicted protein - Sclerotinia
           sclerotiorum 1980
          Length = 521

 Score = 33.1 bits (72), Expect = 7.6
 Identities = 19/55 (34%), Positives = 25/55 (45%)
 Frame = +3

Query: 111 TACERMFRNWLRCNCDSLIYYIFRCQQKIILRAXSWGFKLSFKAPDL*RLRPLSW 275
           TACE M++  LRC  +SLI  IF    K    A  +G ++     D  R     W
Sbjct: 42  TACEAMYKETLRCGLESLIGTIFTGDSKTWDDAMEYGRQVILAPQDTKRRASSPW 96


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,963,324
Number of Sequences: 1657284
Number of extensions: 12947248
Number of successful extensions: 24868
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24867
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 62558016040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)