Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0432
         (757 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_1065 + 10983528-10983992,10985240-10985293                       31   0.99 
07_01_0717 - 5482084-5482482                                           29   5.3  

>12_01_1065 + 10983528-10983992,10985240-10985293
          Length = 172

 Score = 31.1 bits (67), Expect = 0.99
 Identities = 14/20 (70%), Positives = 16/20 (80%)
 Frame = +1

Query: 103 RLILPVRECSGIGSGVTVTA 162
           RL+LP +ECSG GS V VTA
Sbjct: 22  RLLLPCKECSGSGSVVHVTA 41


>07_01_0717 - 5482084-5482482
          Length = 132

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +1

Query: 103 RLILPVRECSGIGSGVTVTA 162
           RL+LP +ECSG G  V VTA
Sbjct: 22  RLLLPRKECSGSGGVVHVTA 41


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,361,591
Number of Sequences: 37544
Number of extensions: 323897
Number of successful extensions: 560
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 553
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 560
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 2016060588
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)