Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0432
         (757 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex det...    24   1.3  
DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex det...    24   1.3  
DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex det...    24   1.3  
DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex det...    24   1.3  
DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex det...    24   1.3  
AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective...    22   5.4  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   9.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   9.4  

>DQ325113-1|ABD14127.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 754 FTVQSYNNIAISSYNFNNLQVLDHRYYILKYTFKI 650
           +   +YNN   ++YN NN + L  +YY + Y  +I
Sbjct: 89  YKYSNYNNYNNNNYNNNNYKKL--QYYNINYIEQI 121


>DQ325112-1|ABD14126.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 754 FTVQSYNNIAISSYNFNNLQVLDHRYYILKYTFKI 650
           +   +YNN   ++YN NN + L  +YY + Y  +I
Sbjct: 89  YKYSNYNNYNNNNYNNNNYKKL--QYYNINYIEQI 121


>DQ325111-1|ABD14125.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 754 FTVQSYNNIAISSYNFNNLQVLDHRYYILKYTFKI 650
           +   +YNN   ++YN NN + L  +YY + Y  +I
Sbjct: 89  YKYSNYNNYNNNNYNNNNYKKL--QYYNINYIEQI 121


>DQ325110-1|ABD14124.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 754 FTVQSYNNIAISSYNFNNLQVLDHRYYILKYTFKI 650
           +   +YNN   ++YN NN + L  +YY + Y  +I
Sbjct: 89  YKYSNYNNYNNNNYNNNNYKKL--QYYNINYIEQI 121


>DQ325076-1|ABD14090.1|  191|Apis mellifera complementary sex
           determiner protein.
          Length = 191

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 11/33 (33%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -1

Query: 742 SYNNIAISSYNFNNLQVLDHR--YYILKYTFKI 650
           +YNN   ++YN+NN    +++  YY + Y  +I
Sbjct: 95  NYNNNNYNNYNYNNNNYNNYKKLYYNINYIEQI 127


>AB238796-1|BAE93398.1|  128|Apis mellifera Queen brain-selective
           protein-1 protein.
          Length = 128

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 624 DRSIKLKYSLGVASSCGYIARGNG 553
           D   K KY + ++S+CG +    G
Sbjct: 41  DSCHKCKYGIAMSSACGIVQCAKG 64


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 310 GRKDHWRPLQFHQDRGLSL*RSGALKDNL 224
           GR+D W  + F++++   L  S  LK+ L
Sbjct: 542 GREDFWNSINFNENK---LHTSDTLKEEL 567


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -1

Query: 310 GRKDHWRPLQFHQDRGLSL*RSGALKDNL 224
           GR+D W  + F++++   L  S  LK+ L
Sbjct: 542 GREDFWNSINFNENK---LHTSDTLKEEL 567


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 204,311
Number of Sequences: 438
Number of extensions: 4462
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)