Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0430
         (668 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    25   0.74 
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   3.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    21   6.9  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    21   6.9  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   9.1  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   9.1  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   9.1  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   9.1  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.1  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.1  

>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 24.6 bits (51), Expect = 0.74
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +2

Query: 455 EVIEHEIENR*SWNQAMR*GCGSGSTTKADYNH 553
           +VI H I+N+ SW Q ++         K+ YNH
Sbjct: 84  KVIRHLIKNKPSWWQELQEKYDPKGEYKSRYNH 116


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 242 ILVISFFLGLCFVCIMQHSIQL 177
           ILV+ FF  L  +C+  + + L
Sbjct: 252 ILVVQFFCSLVALCLTMYKLSL 273


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = -3

Query: 489 DHLFSISCSITS 454
           +H FS+ CSI S
Sbjct: 346 EHFFSVKCSIQS 357


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -1

Query: 254 NLSCILVISFFLGLCFVCI 198
           N+S I+++SF   L F+ I
Sbjct: 161 NMSYIIIVSFATNLYFIII 179


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 353 NTAAKKPVPKAENPQPSVD 409
           +T    P P   NPQ  VD
Sbjct: 452 STTEAPPAPAVSNPQNEVD 470


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 242  ILVISFFLGLCFVCIMQHSIQL 177
            I+ I FF+ +CF C  + +IQL
Sbjct: 951  IIPILFFMLVCFTC--KSNIQL 970


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 242  ILVISFFLGLCFVCIMQHSIQL 177
            I+ I FF+ +CF C  + +IQL
Sbjct: 951  IIPILFFMLVCFTC--KSNIQL 970


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 242  ILVISFFLGLCFVCIMQHSIQL 177
            I+ I FF+ +CF C  + +IQL
Sbjct: 951  IIPILFFMLVCFTC--KSNIQL 970


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = -1

Query: 242  ILVISFFLGLCFVCIMQHSIQL 177
            I+ I FF+ +CF C  + +IQL
Sbjct: 951  IIPILFFMLVCFTC--KSNIQL 970


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 623 VSGERCVSASPVPS 664
           VSG RCV+  PV S
Sbjct: 134 VSGLRCVNGIPVSS 147


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +2

Query: 623 VSGERCVSASPVPS 664
           VSG RCV+  PV S
Sbjct: 134 VSGLRCVNGIPVSS 147


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 167,378
Number of Sequences: 336
Number of extensions: 3721
Number of successful extensions: 17
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)