BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0430
(668 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 25 2.9
AF510719-1|AAP47148.1| 591|Anopheles gambiae ammonium transport... 23 6.6
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 24.6 bits (51), Expect = 2.9
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 272 STVRRYW-RTSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQN 439
ST RY RT ++ + +PP T++++ P + + + + PPQN
Sbjct: 313 STEHRYTTRTPTTTHRLAARTSTPPDPETTSSQQCHPPVNDTLEAPNSTLVSGPPQN 369
>AF510719-1|AAP47148.1| 591|Anopheles gambiae ammonium
transport-like protein protein.
Length = 591
Score = 23.4 bits (48), Expect = 6.6
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 382 FWYWFFGCSIVVGRWRLFLNYFSVG 308
F YW FG ++ GR L + ++G
Sbjct: 90 FTYWLFGYAMAFGRGELNNPFVALG 114
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,495
Number of Sequences: 2352
Number of extensions: 15643
Number of successful extensions: 20
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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