Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0430
(668 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099915-7|AAU05581.1| 468|Caenorhabditis elegans Hypothetical ... 30 1.7
AF099915-6|AAU05582.1| 471|Caenorhabditis elegans Hypothetical ... 30 1.7
Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical pr... 29 3.9
U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short for... 29 3.9
U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form... 29 3.9
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 29 3.9
AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical... 29 3.9
Z82083-4|CAB04972.1| 371|Caenorhabditis elegans Hypothetical pr... 28 6.9
Z49911-10|CAA90134.1| 471|Caenorhabditis elegans Hypothetical p... 28 6.9
Z49909-18|CAA90117.1| 471|Caenorhabditis elegans Hypothetical p... 28 6.9
Z72506-3|CAA96617.1| 310|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical pr... 27 9.1
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF000299-7|AAC47982.1| 168|Caenorhabditis elegans Hypothetical ... 27 9.1
>AF099915-7|AAU05581.1| 468|Caenorhabditis elegans Hypothetical
protein E02H9.3a protein.
Length = 468
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Frame = +2
Query: 266 PRSTV--RRYWRTSADS-NTKII-------QKESPPANNNTAAKKPVPKAENPQPSVDLS 415
P STV +R+ R NTK++ QK+ PANNN A PK + + +
Sbjct: 233 PNSTVVGKRFQRPQTPKQNTKVVGSGFPSPQKQVTPANNNKVAGSGFPKPPKKEEKIVGT 292
Query: 416 FFQSPPQN 439
FQ P ++
Sbjct: 293 GFQPPKKD 300
>AF099915-6|AAU05582.1| 471|Caenorhabditis elegans Hypothetical
protein E02H9.3b protein.
Length = 471
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/68 (32%), Positives = 32/68 (47%), Gaps = 10/68 (14%)
Frame = +2
Query: 266 PRSTV--RRYWRTSADS-NTKII-------QKESPPANNNTAAKKPVPKAENPQPSVDLS 415
P STV +R+ R NTK++ QK+ PANNN A PK + + +
Sbjct: 236 PNSTVVGKRFQRPQTPKQNTKVVGSGFPSPQKQVTPANNNKVAGSGFPKPPKKEEKIVGT 295
Query: 416 FFQSPPQN 439
FQ P ++
Sbjct: 296 GFQPPKKD 303
>Z71260-1|CAA95798.1| 744|Caenorhabditis elegans Hypothetical
protein F15C11.1 protein.
Length = 744
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +2
Query: 272 STVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRT 451
S+VR+ S++ K+ + E PP + P PK ENP ++ + ++ P ++
Sbjct: 524 SSVRQDILESSEFEEKLKKLEEPPILEQQVSTTPNPKNENPLLAMQKMWAETEPPPPRQM 583
Query: 452 IEVIEHE 472
+ +H+
Sbjct: 584 PVLSKHQ 590
>U60113-1|AAB03334.1| 715|Caenorhabditis elegans SEM-4 short form
protein.
Length = 715
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +2
Query: 272 STVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRT 451
S+VR+ S++ K+ + E PP + P PK ENP ++ + ++ P ++
Sbjct: 495 SSVRQDILESSEFEEKLKKLEEPPILEQQVSTTPNPKNENPLLAMQKMWAETEPPPPRQM 554
Query: 452 IEVIEHE 472
+ +H+
Sbjct: 555 PVLSKHQ 561
>U60112-1|AAB03333.1| 744|Caenorhabditis elegans SEM-4 long form
protein.
Length = 744
Score = 28.7 bits (61), Expect = 3.9
Identities = 16/67 (23%), Positives = 33/67 (49%)
Frame = +2
Query: 272 STVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRT 451
S+VR+ S++ K+ + E PP + P PK ENP ++ + ++ P ++
Sbjct: 524 SSVRQDILESSEFEEKLKKLEEPPILEQQVSTTPNPKNENPLLAMQKMWAETEPPPPRQM 583
Query: 452 IEVIEHE 472
+ +H+
Sbjct: 584 PVLSKHQ 590
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical protein
C34E10.8 protein.
Length = 1024
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/52 (28%), Positives = 27/52 (51%)
Frame = +2
Query: 296 TSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRT 451
T++ S+ + + E PPA ++ PVP E + +D ++P + KRT
Sbjct: 875 TTSSSSAETVSGE-PPAKKSSDVSAPVPSPEKEKEKIDRP--KTPKSSTKRT 923
>AF003386-14|AAK82896.1| 811|Caenorhabditis elegans Hypothetical
protein F59E12.1 protein.
Length = 811
Score = 28.7 bits (61), Expect = 3.9
Identities = 12/55 (21%), Positives = 28/55 (50%)
Frame = +2
Query: 299 SADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVI 463
S + T ++ PP ++ T + + P++D+SFF +PP+ ++ + +
Sbjct: 171 SLNLETLVLPPTKPPGDDVTTGSRGFLTPTHSTPALDMSFF-TPPRQMRTLADAV 224
>Z82083-4|CAB04972.1| 371|Caenorhabditis elegans Hypothetical
protein ZK1010.6 protein.
Length = 371
Score = 27.9 bits (59), Expect = 6.9
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = -1
Query: 314 CWNRHWCANNDEQCCAGHFRN 252
C N +C + + CC GH++N
Sbjct: 55 CQNYGYCNSEKKVCCLGHYKN 75
>Z49911-10|CAA90134.1| 471|Caenorhabditis elegans Hypothetical
protein C14A4.13 protein.
Length = 471
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 308 SNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLS 415
S+ II+KE PP A KPV K P+P V +S
Sbjct: 367 SDDTIIEKEGPP-----PAPKPVSKPVPPKPGVTMS 397
>Z49909-18|CAA90117.1| 471|Caenorhabditis elegans Hypothetical
protein C14A4.13 protein.
Length = 471
Score = 27.9 bits (59), Expect = 6.9
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +2
Query: 308 SNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLS 415
S+ II+KE PP A KPV K P+P V +S
Sbjct: 367 SDDTIIEKEGPP-----PAPKPVSKPVPPKPGVTMS 397
>Z72506-3|CAA96617.1| 310|Caenorhabditis elegans Hypothetical
protein F07A5.2 protein.
Length = 310
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 299 SADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSP 430
S S+ K I K+SP + ++K +PK E+ P + ++P
Sbjct: 127 SPGSSRKSILKKSPMKKRRSLSRKSLPKKEHIPPVQKFAIIKNP 170
>Z49127-3|CAA88946.1| 523|Caenorhabditis elegans Hypothetical
protein F13D12.4a protein.
Length = 523
Score = 27.5 bits (58), Expect = 9.1
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = -1
Query: 527 SHFHNLTSSLDSRITCFQFHARLPQWFF---LNFGAEIEKRISQQKAGDSQLLV 375
+H + + + + I F F A +P W F L G + + S+Q G +QLLV
Sbjct: 159 THSYRIPLGVTAGICPFNFPAMIPLWMFPVALATGNTMVIKPSEQDPGAAQLLV 212
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/37 (37%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +2
Query: 299 SADSNTKIIQK-ESPPANNNTAAKKPVPKAENPQPSV 406
S D N ++ S P + +T A + VPK EN +P+V
Sbjct: 568 SIDQNAAVVSNGSSTPFSVSTHADQIVPKIENKRPAV 604
>AF000299-7|AAC47982.1| 168|Caenorhabditis elegans Hypothetical
protein E03H12.7 protein.
Length = 168
Score = 27.5 bits (58), Expect = 9.1
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +2
Query: 332 ESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHEIENR 484
+SP + + AA KPV +++ P P F+ P ++ K+ ++ E+E++ +
Sbjct: 84 KSPAPDGDAAAAKPVDQSQKPFPK-----FEMPTESKKKK-KMAENEVDKK 128
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,093,773
Number of Sequences: 27780
Number of extensions: 359878
Number of successful extensions: 1251
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1249
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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