Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0430
(668 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g49530.1 68418.m06130 SIN-like family protein low similarity ... 30 1.6
At3g51510.1 68416.m05641 expressed protein 29 3.7
At1g42460.1 68414.m04896 Ulp1 protease family protein contains P... 28 4.9
At1g04160.1 68414.m00406 myosin family protein contains Pfam pro... 28 4.9
At4g19120.2 68417.m02822 early-responsive to dehydration stress ... 28 6.5
At4g19120.1 68417.m02821 early-responsive to dehydration stress ... 28 6.5
At2g18470.1 68415.m02151 protein kinase family protein contains ... 28 6.5
At4g33450.1 68417.m04752 myb family transcription factor (MYB69)... 27 8.5
At2g31820.1 68415.m03886 ankyrin repeat family protein contains ... 27 8.5
At2g29210.1 68415.m03550 splicing factor PWI domain-containing p... 27 8.5
At1g31850.3 68414.m03915 dehydration-responsive protein, putativ... 27 8.5
At1g31850.2 68414.m03914 dehydration-responsive protein, putativ... 27 8.5
At1g31850.1 68414.m03913 dehydration-responsive protein, putativ... 27 8.5
At1g23570.1 68414.m02966 expressed protein contains Pfam profile... 27 8.5
>At5g49530.1 68418.m06130 SIN-like family protein low similarity to
Sex-lethal interactor [Drosophila melanogaster]
GI:6049274; contains Pfam profile PF04801: Sin-like
protein conserved region
Length = 689
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 305 DSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQSPPQNLKRTIEVIEHEIE 478
D K + K A KP PK P+P+ D Q PPQ+ ++ EH+++
Sbjct: 6 DDKPKEVTKTRRFAPGRAGKSKPKPK---PEPTADKPV-QPPPQSQTESVSKTEHDVD 59
>At3g51510.1 68416.m05641 expressed protein
Length = 181
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = +2
Query: 269 RSTVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENP-QPSVDLSFFQSP 430
RSTVRR T+A +K KES P+ N + +P P A N + S F+ P
Sbjct: 49 RSTVRRLVVTAATEGSK-KSKESEPSWANPDSDEPPPWARNEGRSSTSQESFEVP 102
>At1g42460.1 68414.m04896 Ulp1 protease family protein contains Pfam
profile PF02902: Ulp1 protease family, C-terminal
catalytic domain
Length = 762
Score = 28.3 bits (60), Expect = 4.9
Identities = 13/42 (30%), Positives = 17/42 (40%)
Frame = +2
Query: 275 TVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENPQP 400
T + AD NT + PP N A P+P +P P
Sbjct: 292 TQAEHTAADADGNTNDVSSPDPPNKNAEADVNPIPPPCHPVP 333
>At1g04160.1 68414.m00406 myosin family protein contains Pfam
profiles: PF02736 myosin N-terminal SH3-like domain,
PF00063 myosin head (motor domain), PF00612 IQ
calmodulin-binding motif, PF01843: DIL domain
Length = 1500
Score = 28.3 bits (60), Expect = 4.9
Identities = 18/61 (29%), Positives = 25/61 (40%)
Frame = +2
Query: 248 SDFENAPRSTVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENPQPSVDLSFFQS 427
S EN + YW T+ + ++QK PA A K P + + LSF S
Sbjct: 1154 SAIENEDDNGHLAYWLTNTSALLFLLQKSLKPAGAGATASKKPPITTSLFGRMALSFRSS 1213
Query: 428 P 430
P
Sbjct: 1214 P 1214
>At4g19120.2 68417.m02822 early-responsive to dehydration stress
protein (ERD3) identical to ERD3 protein [Arabidopsis
thaliana] GI:15320410; contains Pfam profile PF03141:
Putative methyltransferase; identical to cDNA ERD3
GI:15320409
Length = 600
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/52 (23%), Positives = 21/52 (40%)
Frame = +2
Query: 239 KCSSDFENAPRSTVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENP 394
+CSSD+++ T R W+ +++ PP + P P P
Sbjct: 72 ECSSDYQDYTPCTDPRKWKKYGTHRLTFMERHCPPVFDRKQCLVPPPDGYKP 123
>At4g19120.1 68417.m02821 early-responsive to dehydration stress
protein (ERD3) identical to ERD3 protein [Arabidopsis
thaliana] GI:15320410; contains Pfam profile PF03141:
Putative methyltransferase; identical to cDNA ERD3
GI:15320409
Length = 600
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/52 (23%), Positives = 21/52 (40%)
Frame = +2
Query: 239 KCSSDFENAPRSTVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENP 394
+CSSD+++ T R W+ +++ PP + P P P
Sbjct: 72 ECSSDYQDYTPCTDPRKWKKYGTHRLTFMERHCPPVFDRKQCLVPPPDGYKP 123
>At2g18470.1 68415.m02151 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 633
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = +2
Query: 314 TKIIQKESPPAN-NNTAAKKPVPKAENPQPSVDLSFFQSPPQN 439
T SPP+N N+T + P P +P P S PP +
Sbjct: 11 TNSTSSPSPPSNTNSTTSSPPAPSPPSPTPPQGDSSSSPPPDS 53
>At4g33450.1 68417.m04752 myb family transcription factor (MYB69)
contains PFAM profile: Myb DNA binding domain PF00249;
identical to cDNA putative transcription factor (MYB69)
mRNA, partial cds GI:3941495
Length = 250
Score = 27.5 bits (58), Expect = 8.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 245 SSDFENAPRSTVRRYWRTSADSNTKIIQKESPPANNNTAAK 367
S+ F+N S R +WR D N + + ++ P N N A+
Sbjct: 7 SNSFDNKKPSCQRGHWRPVEDDNLRQLVEQYGPKNWNFIAQ 47
>At2g31820.1 68415.m03886 ankyrin repeat family protein contains
ankyrin repeat domains, Pfam:PF00023
Length = 662
Score = 27.5 bits (58), Expect = 8.5
Identities = 22/91 (24%), Positives = 40/91 (43%)
Frame = +2
Query: 212 TDQEKTK*PKCSSDFENAPRSTVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAEN 391
T++ + K +C FE + + + T D + KI A V K
Sbjct: 368 TNKGRIKIVRCLVSFEGINLNPINKAGDTPLDVSEKI----------GNAELVSVLKEAG 417
Query: 392 PQPSVDLSFFQSPPQNLKRTIEVIEHEIENR 484
+ DL Q+P + LK+T+ I+HE++++
Sbjct: 418 AATAKDLGKPQNPAKQLKQTVSDIKHEVQSQ 448
>At2g29210.1 68415.m03550 splicing factor PWI domain-containing
protein contains Pfam profile PF01480: PWI domain
Length = 878
Score = 27.5 bits (58), Expect = 8.5
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 6/74 (8%)
Frame = +2
Query: 248 SDFENAPRSTVRRYWRTSADSN------TKIIQKESPPANNNTAAKKPVPKAENPQPSVD 409
S F + RS +RR+ R + + ++ + SPPA + P + +P P
Sbjct: 279 SPFRSRSRSPIRRHRRPTHEGRRQSPAPSRRRRSPSPPARRRRSPSPPARRRRSPSPPAR 338
Query: 410 LSFFQSPPQNLKRT 451
+PP +R+
Sbjct: 339 RHRSPTPPARQRRS 352
>At1g31850.3 68414.m03915 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/53 (20%), Positives = 20/53 (37%)
Frame = +2
Query: 236 PKCSSDFENAPRSTVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENP 394
P+C S+F++ T + W+ +++ PP P P P
Sbjct: 77 PECGSEFQDYTPCTDPKRWKKYGVHRLSFLERHCPPVYEKNECLIPPPDGYKP 129
>At1g31850.2 68414.m03914 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/53 (20%), Positives = 20/53 (37%)
Frame = +2
Query: 236 PKCSSDFENAPRSTVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENP 394
P+C S+F++ T + W+ +++ PP P P P
Sbjct: 77 PECGSEFQDYTPCTDPKRWKKYGVHRLSFLERHCPPVYEKNECLIPPPDGYKP 129
>At1g31850.1 68414.m03913 dehydration-responsive protein, putative
strong similarity to early-responsive to dehydration
stress ERD3 protein [Arabidopsis thaliana] GI:15320410;
contains Pfam profile PF03141: Putative
methyltransferase
Length = 603
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/53 (20%), Positives = 20/53 (37%)
Frame = +2
Query: 236 PKCSSDFENAPRSTVRRYWRTSADSNTKIIQKESPPANNNTAAKKPVPKAENP 394
P+C S+F++ T + W+ +++ PP P P P
Sbjct: 77 PECGSEFQDYTPCTDPKRWKKYGVHRLSFLERHCPPVYEKNECLIPPPDGYKP 129
>At1g23570.1 68414.m02966 expressed protein contains Pfam profile
PF02713: Domain of unknown function DUF220
Length = 314
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/43 (25%), Positives = 24/43 (55%)
Frame = +3
Query: 183 YAMLHYADETQTKKKRNNQNAAQISKMPRAALFVVIGAPVPIP 311
Y L+Y+DE++++K QI+K+ + + +G+ +P
Sbjct: 123 YHSLYYSDESKSRKVLMEDGPRQIAKVKKTVDWKFLGSSFAVP 165
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,987,322
Number of Sequences: 28952
Number of extensions: 323929
Number of successful extensions: 922
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 880
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 918
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1412971776
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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