Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0429
         (728 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023637-1|AAY85037.1|  172|Drosophila melanogaster IP05651p pro...    82   7e-16
AE014298-3073|AAF50865.1|  131|Drosophila melanogaster CG15449-P...    82   7e-16
AE014298-1261|AAF46435.2|  125|Drosophila melanogaster CG7267-PB...    43   4e-04

>BT023637-1|AAY85037.1|  172|Drosophila melanogaster IP05651p
           protein.
          Length = 172

 Score = 82.2 bits (194), Expect = 7e-16
 Identities = 40/76 (52%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
 Frame = +2

Query: 59  RLSIIKFLELALTCSCVALHYHSYNADADI--GMLVTGTFVGYLIIFAGAAAGYIMQTPS 232
           RL+++KFLEL    +C+ LH++S+N D DI    L TGTF GY+I+  G  AG +M+ P 
Sbjct: 50  RLNVVKFLELGFAVACLVLHFYSFN-DRDIMTSFLATGTFTGYIIVVIGVFAGVLMRAPI 108

Query: 233 HKRIDIFFRWSVLPCS 280
           HKRIDIFF  SVL C+
Sbjct: 109 HKRIDIFF--SVLGCT 122



 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 24/54 (44%), Positives = 35/54 (64%)
 Frame = +1

Query: 256 SLVGVALFVASGAIIIDRFQHYGKSEIKDKNLAKASLAIINGAILLVDAVLTQR 417
           S++G  LFVASG  II+ ++   ++  +D  L KASL+I+NG +   DAV T R
Sbjct: 117 SVLGCTLFVASGVFIIEAWEFSFRTRTRDLALIKASLSIVNGVLFGFDAVFTFR 170


>AE014298-3073|AAF50865.1|  131|Drosophila melanogaster CG15449-PA
           protein.
          Length = 131

 Score = 82.2 bits (194), Expect = 7e-16
 Identities = 40/76 (52%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
 Frame = +2

Query: 59  RLSIIKFLELALTCSCVALHYHSYNADADI--GMLVTGTFVGYLIIFAGAAAGYIMQTPS 232
           RL+++KFLEL    +C+ LH++S+N D DI    L TGTF GY+I+  G  AG +M+ P 
Sbjct: 9   RLNVVKFLELGFAVACLVLHFYSFN-DRDIMTSFLATGTFTGYIIVVIGVFAGVLMRAPI 67

Query: 233 HKRIDIFFRWSVLPCS 280
           HKRIDIFF  SVL C+
Sbjct: 68  HKRIDIFF--SVLGCT 81



 Score = 48.0 bits (109), Expect = 1e-05
 Identities = 24/54 (44%), Positives = 35/54 (64%)
 Frame = +1

Query: 256 SLVGVALFVASGAIIIDRFQHYGKSEIKDKNLAKASLAIINGAILLVDAVLTQR 417
           S++G  LFVASG  II+ ++   ++  +D  L KASL+I+NG +   DAV T R
Sbjct: 76  SVLGCTLFVASGVFIIEAWEFSFRTRTRDLALIKASLSIVNGVLFGFDAVFTFR 129


>AE014298-1261|AAF46435.2|  125|Drosophila melanogaster CG7267-PB
           protein.
          Length = 125

 Score = 43.2 bits (97), Expect = 4e-04
 Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 2/54 (3%)
 Frame = +1

Query: 250 LLSLVGVALFVASGAIIIDRFQHYG--KSEIKDKNLAKASLAIINGAILLVDAV 405
           L SL+G  LFVASGA++ID + H G   ++ K + +   SL IIN A+ L+D +
Sbjct: 68  LFSLIGCLLFVASGALVIDEW-HGGLLNTDRKRQAIGAGSLMIINAAVFLLDTL 120



 Score = 35.9 bits (79), Expect = 0.056
 Identities = 20/77 (25%), Positives = 39/77 (50%)
 Frame = +2

Query: 47  MAISRLSIIKFLELALTCSCVALHYHSYNADADIGMLVTGTFVGYLIIFAGAAAGYIMQT 226
           M  +   ++K +ELA+  +C+ L+    N      ++V GT  GY +I      G+++ +
Sbjct: 1   MEFNNRLLLKIIELAIAIACIVLYETVGNLSLH-PVIVAGTVGGYTVICGVLLIGHVLNS 59

Query: 227 PSHKRIDIFFRWSVLPC 277
              KR++  F  S++ C
Sbjct: 60  LVEKRLNALF--SLIGC 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,518,603
Number of Sequences: 53049
Number of extensions: 714251
Number of successful extensions: 2148
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2036
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2145
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)