Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0429
(728 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g77640.1 68414.m09039 AP2 domain-containing transcription fac... 32 0.45
At3g21180.1 68416.m02677 calcium-transporting ATPase, plasma mem... 30 1.8
At3g11810.1 68416.m01447 expressed protein 29 3.2
At5g44930.2 68418.m05510 exostosin family protein contains Pfam ... 29 4.2
At5g44930.1 68418.m05509 exostosin family protein contains Pfam ... 29 4.2
At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nea... 28 5.5
At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nea... 28 5.5
At2g14720.2 68415.m01657 vacuolar sorting receptor, putative ide... 28 5.5
At2g14720.1 68415.m01656 vacuolar sorting receptor, putative ide... 28 5.5
At5g19340.1 68418.m02305 expressed protein 28 7.3
>At1g77640.1 68414.m09039 AP2 domain-containing transcription
factor, putative Similar to DREB1A (GP:3660548)
[Arabidopsis thaliana]
Length = 244
Score = 31.9 bits (69), Expect = 0.45
Identities = 21/50 (42%), Positives = 24/50 (48%)
Frame = +3
Query: 417 RRLNYVHKIELHNQKRISNAAYKYNAVLLGFYGPPNNLNSTAITVTSIFL 566
R N +I L + AA Y+A LL GP NLN IT TS FL
Sbjct: 59 RAPNQKTRIWLGSYSTAEAAARAYDAALLCLKGPKANLNFPNITTTSPFL 108
>At3g21180.1 68416.m02677 calcium-transporting ATPase, plasma
membrane-type, putative / Ca2+-ATPase, putative (ACA9)
identical to SP|Q9LU41 Potential calcium-transporting
ATPase 9, plasma membrane-type (EC 3.6.3.8)
(Ca(2+)-ATPase isoform 9) {Arabidopsis thaliana}
Length = 1086
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = -2
Query: 664 WCLLALVLPIKRQFSYHLHTKKKKQLLNKHNMYR-NIEVTVIAVEFRLLG 518
W ALVL R+F Y L K++ N+ M R + +V A+ F+L G
Sbjct: 61 WRQAALVLNASRRFRYTLDLNKEEHYDNRRRMIRAHAQVIRAALLFKLAG 110
>At3g11810.1 68416.m01447 expressed protein
Length = 348
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +3
Query: 423 LNYVHKIELHNQKRISNAAYKYNAVLLGFYGPPNNLNSTAITVTSIFLYILCLFSN 590
+ Y+ I + N I + AY +V GFYG P LNS + + FL +L ++
Sbjct: 94 IGYIVVITVFNLLAIGSIAY---SVFQGFYGRPVKLNSAVKSSFASFLPLLATLTS 146
>At5g44930.2 68418.m05510 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 443
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +3
Query: 519 PNNLNSTAITVTSIFLYILCLFSNCFFF 602
PNN +S +TV+ + ++++ +F N FF+
Sbjct: 8 PNNSSSKKVTVSVLSVFLVFVFVNTFFY 35
>At5g44930.1 68418.m05509 exostosin family protein contains Pfam
profile: PF03016 Exostosin family
Length = 443
Score = 28.7 bits (61), Expect = 4.2
Identities = 10/28 (35%), Positives = 20/28 (71%)
Frame = +3
Query: 519 PNNLNSTAITVTSIFLYILCLFSNCFFF 602
PNN +S +TV+ + ++++ +F N FF+
Sbjct: 8 PNNSSSKKVTVSVLSVFLVFVFVNTFFY 35
>At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 28.3 bits (60), Expect = 5.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 263 TSERRCRSVCVKESALCSPRPHQ 195
T R+C+S C+ + C+P P Q
Sbjct: 246 TLSRQCKSQCINKGRYCAPDPEQ 268
>At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 28.3 bits (60), Expect = 5.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 263 TSERRCRSVCVKESALCSPRPHQ 195
T R+C+S C+ + C+P P Q
Sbjct: 246 TLSRQCKSQCINKGRYCAPDPEQ 268
>At2g14720.2 68415.m01657 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 28.3 bits (60), Expect = 5.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 263 TSERRCRSVCVKESALCSPRPHQ 195
T R+C+S C+ + C+P P Q
Sbjct: 246 TLSRQCKSQCINKGRYCAPDPEQ 268
>At2g14720.1 68415.m01656 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 28.3 bits (60), Expect = 5.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = -1
Query: 263 TSERRCRSVCVKESALCSPRPHQ 195
T R+C+S C+ + C+P P Q
Sbjct: 246 TLSRQCKSQCINKGRYCAPDPEQ 268
>At5g19340.1 68418.m02305 expressed protein
Length = 263
Score = 27.9 bits (59), Expect = 7.3
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 81 WSWHLRVRAWLSTTTVTMQMRISACSSPVPLSGTSSYS 194
W LR++ +TTT T R+S+ S S TSS S
Sbjct: 160 WKELLRLKKQRTTTTTTASTRVSSLSPSSSSSSTSSSS 197
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,436,650
Number of Sequences: 28952
Number of extensions: 326596
Number of successful extensions: 881
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 881
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1594686376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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