Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0428
         (727 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.83 
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   1.9  
AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory recept...    21   7.7  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 24.6 bits (51), Expect = 0.83
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = -1

Query: 586 FLFVYLHYVFCINYPFETSHFVLVL 512
           + F Y+H +FC  +   T H + +L
Sbjct: 259 YYFYYMHLLFCCAFIIFTMHLLFLL 283


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = -1

Query: 601 MISITFLFVYLHYVFCINYPFETSH 527
           ++ + F+F Y  Y+F + Y + + H
Sbjct: 140 LLQLVFVFCYFIYLFTVYYIYYSVH 164


>AM292336-1|CAL23148.2|  455|Tribolium castaneum gustatory receptor
           candidate 15 protein.
          Length = 455

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -3

Query: 401 LILNLN*MTLYQNAYRIFL 345
           ++ NL  ++LY NAY +F+
Sbjct: 67  VVRNLLDISLYLNAYHVFV 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 128,975
Number of Sequences: 336
Number of extensions: 2430
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19363530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)