Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0427
         (726 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical pr...    30   1.5  
Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical p...    30   1.5  
AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical ...    30   1.5  
AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical ...    30   1.5  
Z82266-12|CAB05185.2| 1080|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z92847-3|CAB07422.2|  323|Caenorhabditis elegans Hypothetical pr...    28   7.8  
Z68119-6|CAE17916.1|  181|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical protein
            T25E12.4a protein.
          Length = 1101

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 431  FDAFINLLMNTPFNHFSMFNAFVIIFYKAINY*LCV 538
            F  F++LL+  PF  + +F+ F+I F   + +  CV
Sbjct: 1061 FSYFLHLLVTYPFKFYFVFSCFIIFFPNFLTHIPCV 1096


>Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical
            protein T25E12.4a protein.
          Length = 1101

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 431  FDAFINLLMNTPFNHFSMFNAFVIIFYKAINY*LCV 538
            F  F++LL+  PF  + +F+ F+I F   + +  CV
Sbjct: 1061 FSYFLHLLVTYPFKFYFVFSCFIIFFPNFLTHIPCV 1096


>AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical
            protein T25E12.4a protein.
          Length = 1101

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 431  FDAFINLLMNTPFNHFSMFNAFVIIFYKAINY*LCV 538
            F  F++LL+  PF  + +F+ F+I F   + +  CV
Sbjct: 1061 FSYFLHLLVTYPFKFYFVFSCFIIFFPNFLTHIPCV 1096


>AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical
            protein T25E12.4a protein.
          Length = 1101

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = +2

Query: 431  FDAFINLLMNTPFNHFSMFNAFVIIFYKAINY*LCV 538
            F  F++LL+  PF  + +F+ F+I F   + +  CV
Sbjct: 1061 FSYFLHLLVTYPFKFYFVFSCFIIFFPNFLTHIPCV 1096


>Z82266-12|CAB05185.2| 1080|Caenorhabditis elegans Hypothetical
           protein F23B2.11 protein.
          Length = 1080

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 12/23 (52%), Positives = 14/23 (60%)
 Frame = +2

Query: 458 NTPFNHFSMFNAFVIIFYKAINY 526
           NTP N+   FN F+IIFY    Y
Sbjct: 837 NTPLNNIVAFNQFMIIFYNGGQY 859


>Z92847-3|CAB07422.2|  323|Caenorhabditis elegans Hypothetical
           protein H01G02.2 protein.
          Length = 323

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 121 YRHTLKIVRKHFLLEHILVTIRNSIKIFGF 32
           Y H+ +I+ +    E+ILVT RN +KI  F
Sbjct: 117 YLHSKEIMHRDIKPENILVTSRNVVKIADF 146


>Z68119-6|CAE17916.1|  181|Caenorhabditis elegans Hypothetical
           protein T18D3.9 protein.
          Length = 181

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 9/32 (28%), Positives = 18/32 (56%)
 Frame = +3

Query: 24  CLMKPKIFIEFLIVTRICSRRKCFLTILRVCL 119
           C M P +FI F ++ ++    K  L + ++C+
Sbjct: 57  CFMAPSLFIWFRLLEKVKGNNKSLLLVKKLCI 88


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,113,115
Number of Sequences: 27780
Number of extensions: 339043
Number of successful extensions: 673
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)