Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0426
(537 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 80 1e-15
SB_42643| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_33348| Best HMM Match : HMG_box (HMM E-Value=3.2e-34) 50 1e-06
SB_13764| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 8e-06
SB_53304| Best HMM Match : HMG_box (HMM E-Value=1.9e-32) 47 8e-06
SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19) 45 3e-05
SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22) 45 5e-05
SB_25642| Best HMM Match : HMG_box (HMM E-Value=1.3e-29) 44 6e-05
SB_10678| Best HMM Match : HMG_box (HMM E-Value=1.3e-29) 44 6e-05
SB_41131| Best HMM Match : HMG_box (HMM E-Value=4.1e-28) 44 1e-04
SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 1e-04
SB_29734| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_24989| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_26162| Best HMM Match : HMG_box (HMM E-Value=1.5e-31) 42 3e-04
SB_40969| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_3516| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_31139| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 6e-04
SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26) 41 7e-04
SB_2908| Best HMM Match : HMG_box (HMM E-Value=1.5e-08) 40 0.002
SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.002
SB_1832| Best HMM Match : HMG_box (HMM E-Value=1.7e-22) 38 0.005
SB_16438| Best HMM Match : HMG_box (HMM E-Value=7.2e-31) 38 0.007
SB_8014| Best HMM Match : HMG_box (HMM E-Value=0.00031) 36 0.021
SB_57274| Best HMM Match : HMG_box (HMM E-Value=0.021) 36 0.028
SB_27742| Best HMM Match : HMG_box (HMM E-Value=1.3e-24) 36 0.028
SB_16481| Best HMM Match : HMG_box (HMM E-Value=1.2e-08) 34 0.064
SB_23680| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.26
SB_46509| Best HMM Match : HMG_box (HMM E-Value=4.2e-10) 30 1.4
SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_54428| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.2
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 80.2 bits (189), Expect = 1e-15
Identities = 32/56 (57%), Positives = 44/56 (78%)
Frame = +3
Query: 51 KKVKMTDKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDKTEW 218
KK K + PKR MSAYMLWLN R++IK +NPG+ VTE++K GE+WK++ DK++W
Sbjct: 534 KKKKDPNAPKRAMSAYMLWLNDTRQEIKDKNPGISVTEVSKVAGEMWKNLTDKSKW 589
>SB_42643| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 557
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 57 VKMTDKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKD 206
VK + KRPM+A+M+W R +I ENP + +EI+K+ G WK + D
Sbjct: 321 VKPVEHVKRPMNAFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLAD 370
>SB_33348| Best HMM Match : HMG_box (HMM E-Value=3.2e-34)
Length = 179
Score = 50.0 bits (114), Expect = 1e-06
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +3
Query: 57 VKMTDKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKD 206
VK + KRPM+A+M+W R +I ENP + +EI+K+ G WK + D
Sbjct: 4 VKPVEHVKRPMNAFMVWSREERRKIAQENPKMHNSEISKRLGSEWKQLAD 53
>SB_13764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1099
Score = 47.6 bits (108), Expect = 6e-06
Identities = 18/52 (34%), Positives = 32/52 (61%)
Frame = +3
Query: 54 KVKMTDKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDK 209
K D+ KRPM+A+M+W R ++ +NP + +EI+K+ G WK + ++
Sbjct: 782 KANSADRVKRPMNAFMVWSRERRRKMAQDNPKMHNSEISKRLGSEWKLLSEQ 833
>SB_21901| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 192
Score = 47.2 bits (107), Expect = 8e-06
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Frame = +3
Query: 48 RKKVKMTDKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM--KDKTEW 218
+K+ K +KPKR +SAY ++N R+ +K +NP ++K GE+W M DKT++
Sbjct: 93 KKQTKDPNKPKRCLSAYFHFINLKRDDVKKDNPNASGGALSKVLGEMWSKMTDDDKTQY 151
Score = 35.9 bits (79), Expect = 0.021
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +3
Query: 60 KMTDKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDK 209
K +KPK SAY +L RE+++ E + + +K E WK+M ++
Sbjct: 7 KDPNKPKGAKSAYNFFLQDQREKLQREEGKFSLADFSKVSAEKWKNMSEE 56
>SB_53304| Best HMM Match : HMG_box (HMM E-Value=1.9e-32)
Length = 398
Score = 47.2 bits (107), Expect = 8e-06
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Frame = +3
Query: 66 TDKP--KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKD 206
T KP KRPM+A+M+W +AR ++ + P L E++K G++WK + D
Sbjct: 59 TQKPHVKRPMNAFMVWAQAARRKLADQYPHLHNAELSKTLGKLWKLLND 107
>SB_18968| Best HMM Match : HMG_box (HMM E-Value=1.2e-19)
Length = 1204
Score = 45.2 bits (102), Expect = 3e-05
Identities = 16/54 (29%), Positives = 35/54 (64%)
Frame = +3
Query: 48 RKKVKMTDKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDK 209
++K K+ +P +P+SAY ++ + I+ +NP + EIAK G++W+++ ++
Sbjct: 916 KRKTKIEGEPPKPLSAYQIFFKETQAAIRLQNPSAQFGEIAKIVGQMWENLPEE 969
>SB_23256| Best HMM Match : HMG_box (HMM E-Value=3.3e-22)
Length = 523
Score = 44.8 bits (101), Expect = 5e-05
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +3
Query: 48 RKKV-KMTDKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 200
RKK K + PK P++ Y+ +LN RE+++SENP L E+ + G +W +
Sbjct: 167 RKKAHKDVNAPKAPLTGYVRFLNEHREKVRSENPDLPFHEVTRILGNMWSQL 218
>SB_25642| Best HMM Match : HMG_box (HMM E-Value=1.3e-29)
Length = 267
Score = 44.4 bits (100), Expect = 6e-05
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +3
Query: 78 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 200
KRPM+A+M+W + R Q+ +ENP L ++I+K G W+ +
Sbjct: 8 KRPMNAFMIWSSKKRRQLAAENPKLHNSQISKMLGTEWRKL 48
>SB_10678| Best HMM Match : HMG_box (HMM E-Value=1.3e-29)
Length = 494
Score = 44.4 bits (100), Expect = 6e-05
Identities = 17/41 (41%), Positives = 28/41 (68%)
Frame = +3
Query: 78 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 200
KRPM+A+M+W + R Q+ +ENP L ++I+K G W+ +
Sbjct: 8 KRPMNAFMIWSSKKRRQLAAENPKLHNSQISKMLGTEWRKL 48
>SB_41131| Best HMM Match : HMG_box (HMM E-Value=4.1e-28)
Length = 245
Score = 43.6 bits (98), Expect = 1e-04
Identities = 17/46 (36%), Positives = 28/46 (60%)
Frame = +3
Query: 69 DKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKD 206
D KRP++++M+W R + ENP +R EI+K G+ W+ M +
Sbjct: 8 DHVKRPLNSFMVWAKEKRRAMNRENPKMRNAEISKILGDEWRKMPE 53
>SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 43.2 bits (97), Expect = 1e-04
Identities = 16/47 (34%), Positives = 30/47 (63%)
Frame = +3
Query: 60 KMTDKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 200
K K KRPM+++M+W SAR ++ + P + E++K G++W+ +
Sbjct: 106 KKDPKVKRPMNSFMVWAQSARRKLAEQYPHVHNAELSKMLGKLWRML 152
>SB_29734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 42.3 bits (95), Expect = 2e-04
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = +3
Query: 51 KKVKMTDKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKD 206
KK KRPM+A+M+W R ++ E+P + EI+K+ G+ WK + +
Sbjct: 37 KKKSDMQHVKRPMNAFMVWSQIERRKMAEEHPDMHNAEISKRLGKRWKLLSE 88
>SB_24989| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 143
Score = 42.3 bits (95), Expect = 2e-04
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +3
Query: 60 KMTDKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 200
K D KRPM+AYM+W R +I E P + +EI+K+ G W S+
Sbjct: 3 KPGDHIKRPMNAYMVWSRKERRRIAEECPRMLNSEISKRLGLEWNSL 49
>SB_37758| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 382
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Frame = +3
Query: 48 RKKVKMTDKPKRPMSAYMLW---LNSAREQIKSENPGLRVTEIAKKGGEIWKSM 200
RKK +KPK P++ Y+ + LNS RE +K ++P L EI K G+ W S+
Sbjct: 185 RKKEYDLNKPKAPVTGYVHYVRFLNSRRESVKHQHPHLTFPEITKMLGQEWNSL 238
>SB_26162| Best HMM Match : HMG_box (HMM E-Value=1.5e-31)
Length = 367
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/44 (38%), Positives = 25/44 (56%)
Frame = +3
Query: 78 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDK 209
KRPM+++M+W R + ENP L EI+K G+ W + K
Sbjct: 95 KRPMNSFMIWAKVMRRKFAEENPKLHNAEISKLLGKAWNELTTK 138
>SB_40969| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 41.9 bits (94), Expect = 3e-04
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 78 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 200
KRPM+ +M+W R QI ENPG+ ++K G WK +
Sbjct: 9 KRPMNCFMVWSREKRCQILQENPGINNARLSKLLGMAWKKL 49
>SB_3516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 642
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/45 (35%), Positives = 28/45 (62%)
Frame = +3
Query: 66 TDKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 200
T++ KRPM+A+M+W R ++ NP L E++K G W+++
Sbjct: 363 TERIKRPMNAFMVWAQVERRRLADANPELHNAELSKMLGLTWRAL 407
>SB_31139| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 41.1 bits (92), Expect = 6e-04
Identities = 22/45 (48%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +3
Query: 78 KRPMSAYMLWLNSAREQIKS-ENPGLRVTEIAKKGGEIWKSMKDK 209
KRPM+A+M+W + R +IKS E P + +EI+K G WK+MKD+
Sbjct: 10 KRPMNAFMVW-SKERRRIKSQECPRMHNSEISKILGCEWKAMKDE 53
>SB_16422| Best HMM Match : HMG_box (HMM E-Value=8.7e-26)
Length = 245
Score = 40.7 bits (91), Expect = 7e-04
Identities = 16/48 (33%), Positives = 31/48 (64%)
Frame = +3
Query: 66 TDKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDK 209
++K KRP++A++LW R I +ENP + +I++K G W+ + ++
Sbjct: 16 SEKIKRPLNAFILWSKKRRRVIANENPQMHNFDISRKLGLEWQKLTEE 63
>SB_2908| Best HMM Match : HMG_box (HMM E-Value=1.5e-08)
Length = 324
Score = 39.5 bits (88), Expect = 0.002
Identities = 13/44 (29%), Positives = 28/44 (63%)
Frame = +3
Query: 75 PKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKD 206
P++P+ YM + +Q+K++NP ++ +I K G++W+ + D
Sbjct: 28 PEKPLMPYMRYSRKVWDQVKNQNPDFKLWDIGKIIGQMWRDLDD 71
>SB_52386| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 39.1 bits (87), Expect = 0.002
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +3
Query: 72 KPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDKTE 215
K KRPM+A+M+W R I P EI+ + GEIW + + +
Sbjct: 100 KVKRPMNAFMIWARLHRSTIAKRYPQANNAEISIRLGEIWNDLSSEQQ 147
>SB_1832| Best HMM Match : HMG_box (HMM E-Value=1.7e-22)
Length = 299
Score = 37.9 bits (84), Expect = 0.005
Identities = 15/42 (35%), Positives = 24/42 (57%)
Frame = +3
Query: 84 PMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDK 209
P+SA+ LW N AR+ + NP + ++ KK WK + +K
Sbjct: 230 PLSAFELWANQARKDLLVSNPDISAKKLKKKLKRKWKEIDEK 271
Score = 35.9 bits (79), Expect = 0.021
Identities = 13/47 (27%), Positives = 28/47 (59%)
Frame = +3
Query: 69 DKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDK 209
++PK P+++Y + R ++ + P L+ TE+A K + W+ M ++
Sbjct: 150 NQPKMPLTSYFRYCQKHRAKLAKKYPNLKSTELAAKLSKKWRKMSEE 196
>SB_16438| Best HMM Match : HMG_box (HMM E-Value=7.2e-31)
Length = 690
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Frame = +3
Query: 21 KNYFKIFAIRKKVKMTDKPKRPMSAYMLWLNSAREQI--KSENPGLRVTEIAKKGGEIWK 194
+ Y K K DKPKRP +AY L+L + R+++ K+ G ++ +A GE W+
Sbjct: 559 QRYLKESGKNDPKKDPDKPKRPPTAYFLFLAAFRKEMAGKALEDGKKIPSLA---GERWR 615
Query: 195 SMKDK 209
M D+
Sbjct: 616 EMSDE 620
Score = 33.5 bits (73), Expect = 0.11
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
Frame = +3
Query: 48 RKKVKMTDKP--KRPMSAYMLWLNSAREQIKSEN-----PGLRVTEIAKKGGEIWKSMKD 206
RKK D P KR SAY+ + + R ++K+++ P + E+AK GE WK + D
Sbjct: 485 RKKKAKGDGPVVKRASSAYIHFTSDFRAKLKAKSAKSGTPLPKANEVAKLAGEEWKKLND 544
Query: 207 K 209
+
Sbjct: 545 E 545
>SB_8014| Best HMM Match : HMG_box (HMM E-Value=0.00031)
Length = 406
Score = 35.9 bits (79), Expect = 0.021
Identities = 15/52 (28%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +3
Query: 69 DKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMK--DKTEW 218
D+ + + + LWL R+QI+ ENP + ++ K + WK + +K W
Sbjct: 327 DRQTKKKNGFSLWLEENRDQIEEENPDIPDEDVVKIAMKTWKGLDSVEKKVW 378
>SB_57274| Best HMM Match : HMG_box (HMM E-Value=0.021)
Length = 200
Score = 35.5 bits (78), Expect = 0.028
Identities = 13/44 (29%), Positives = 24/44 (54%)
Frame = +3
Query: 69 DKPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 200
D+ + + + LWL R+QI+ ENP + ++ K + WK +
Sbjct: 34 DRQTKKKNGFSLWLEENRDQIEEENPDIPDEDVVKIAMKTWKGL 77
>SB_27742| Best HMM Match : HMG_box (HMM E-Value=1.3e-24)
Length = 201
Score = 35.5 bits (78), Expect = 0.028
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +3
Query: 78 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMKDK 209
KRPM+A+M+W + R ++ + P + EI+K G W + ++
Sbjct: 10 KRPMNAFMVWSRTERRKLALKYPNMLNCEISKLLGAEWSRLSEE 53
>SB_16481| Best HMM Match : HMG_box (HMM E-Value=1.2e-08)
Length = 271
Score = 34.3 bits (75), Expect = 0.064
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 78 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 200
K PM+A+M+ R+ S NPG+ +E +K G WK +
Sbjct: 10 KSPMNAFMVCSRGKRKHYASINPGMHNSEFSKSLGPEWKML 50
>SB_23680| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 548
Score = 32.3 bits (70), Expect = 0.26
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 72 KPKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSMK 203
K KRP A+ + +++K ENP L+ EI K + W +++
Sbjct: 305 KHKRPTPAFFRFRQDYADKVKEENPHLKDAEIRKHLSDQWANLE 348
Score = 29.1 bits (62), Expect = 2.4
Identities = 11/42 (26%), Positives = 25/42 (59%)
Frame = +3
Query: 75 PKRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKSM 200
P++P + L++ +IK+EN G+ +I ++ G W+++
Sbjct: 374 PRKPPRHFSLFMRENFAKIKAENQGMSNPDIMRELGAKWRNL 415
>SB_46509| Best HMM Match : HMG_box (HMM E-Value=4.2e-10)
Length = 145
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 78 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKS 197
KR S Y+L+ + R I+ E+P EI++ GE W++
Sbjct: 36 KRGQSGYLLFSHEMRGIIRKEHPEYAFGEISRLIGEEWRN 75
>SB_12182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1361
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 78 KRPMSAYMLWLNSAREQIKSENPGLRVTEIAKKGGEIWKS 197
KR S Y+L+ + R I+ E+P EI++ GE W++
Sbjct: 1269 KRGQSGYLLFSHEMRGIIRKEHPEYAFGEISRLIGEEWRN 1308
>SB_54428| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 28.3 bits (60), Expect = 4.2
Identities = 11/39 (28%), Positives = 20/39 (51%)
Frame = +1
Query: 232 PRPRSNMQRPRILQCQWRWWRRGRKEGSKTREKGQENCC 348
PRP+SN+ P +L+ W + + + + K +N C
Sbjct: 350 PRPKSNLSPPSVLEFDQSPWLKQYIDFNTEKRKNTKNSC 388
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,930,180
Number of Sequences: 59808
Number of extensions: 222020
Number of successful extensions: 635
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 632
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1215643300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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