Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0423
         (774 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.            25   2.0  
EF588503-1|ABQ96738.1|  169|Anopheles gambiae transposase protein.     25   3.4  
AJ302661-1|CAC35526.1|  128|Anopheles gambiae gSG8 protein protein.    25   3.4  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    24   4.5  
AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   6.0  

>DQ342048-1|ABC69940.1|  847|Anopheles gambiae STIP protein.
          Length = 847

 Score = 25.4 bits (53), Expect = 2.0
 Identities = 11/37 (29%), Positives = 21/37 (56%)
 Frame = -1

Query: 771 ERSVHGGVTYKSLPGRRESYRPVHPTLVGRMMCAVCR 661
           ++    G+ +  +PGRRE  + V+   VG++ C + R
Sbjct: 785 QKCAERGIIFAPMPGRRELGKQVY--RVGKLFCYIDR 819


>EF588503-1|ABQ96738.1|  169|Anopheles gambiae transposase protein.
          Length = 169

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 12/37 (32%), Positives = 22/37 (59%)
 Frame = -2

Query: 359 VLRLVCEKTMSFGVWIGVLSSDIVAPTRAGDLLSNIL 249
           +L L+C++ + F + +  L+ + + PTR    LSN L
Sbjct: 112 LLDLICKECLPFNLVVYTLNPNYIMPTRKS--LSNAL 146


>AJ302661-1|CAC35526.1|  128|Anopheles gambiae gSG8 protein protein.
          Length = 128

 Score = 24.6 bits (51), Expect = 3.4
 Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -1

Query: 615 VFVLPFLDRSTTDPVLG-RTLSSNREALCSRITVPVSIFLGKAGCWHCSLRHYSVV 451
           +F+L  L     DP +  RT ++NR  LC  I +  + ++  A C     +H  V+
Sbjct: 13  LFLLLSLATLRGDPFVALRTSTTNRTLLCWAIKLSPTAYVTDAECVRSHRKHQIVM 68


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 14/27 (51%), Positives = 16/27 (59%)
 Frame = +1

Query: 691 KGGMYRTITLPTARQAFIGNTSMDRSL 771
           K  M   I+L T +  FIGNTSMD  L
Sbjct: 181 KRDMINEISLKTRK--FIGNTSMDPQL 205


>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 23.8 bits (49), Expect = 6.0
 Identities = 14/70 (20%), Positives = 32/70 (45%)
 Frame = +1

Query: 217  RSSRRVQSILYKMLLKRSPARVGATISELNTPIQTPKDMVFSQTSLKTRNILKVVDLDRL 396
            +++RR+ S+L +   +       A  ++ +     P+DM  ++  L  R  ++     R 
Sbjct: 1004 QAARRILSVLQEDWREEQQTLAAAEAAQPDPASSLPEDMAEAERRLLRRREVRNRSAQRR 1063

Query: 397  KPEKNQQANG 426
            + ++ QQ  G
Sbjct: 1064 RQQQRQQRLG 1073


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 802,742
Number of Sequences: 2352
Number of extensions: 16608
Number of successful extensions: 44
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 80665782
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)