Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0420
         (459 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z28377-1|CAA82226.1|  264|Caenorhabditis elegans PES-1A protein ...    31   0.40 
Z28376-1|CAA82225.1|  228|Caenorhabditis elegans PES-1B protein ...    31   0.40 
Z28375-1|CAA82224.1|  264|Caenorhabditis elegans PES-1 protein.        31   0.40 
U64609-3|AAB04600.1|  264|Caenorhabditis elegans Patterned expre...    31   0.40 
U80440-3|AAK21470.2|  380|Caenorhabditis elegans Hypothetical pr...    30   0.70 
U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily ass...    27   5.0  
AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.     27   5.0  
AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.     27   5.0  

>Z28377-1|CAA82226.1|  264|Caenorhabditis elegans PES-1A protein
           protein.
          Length = 264

 Score = 31.1 bits (67), Expect = 0.40
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 348 PHTPSQHSHLCCTQSPFIL-LLLMRIFFKNCRNLDD 244
           P  P+Q+ H  C Q+P IL  LL  ++ +N +NL +
Sbjct: 204 PQLPTQNIHQLCMQNPQILATLLQNMYLQNMQNLQN 239


>Z28376-1|CAA82225.1|  228|Caenorhabditis elegans PES-1B protein
           protein.
          Length = 228

 Score = 31.1 bits (67), Expect = 0.40
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 348 PHTPSQHSHLCCTQSPFIL-LLLMRIFFKNCRNLDD 244
           P  P+Q+ H  C Q+P IL  LL  ++ +N +NL +
Sbjct: 168 PQLPTQNIHQLCMQNPQILATLLQNMYLQNMQNLQN 203


>Z28375-1|CAA82224.1|  264|Caenorhabditis elegans PES-1 protein.
          Length = 264

 Score = 31.1 bits (67), Expect = 0.40
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 348 PHTPSQHSHLCCTQSPFIL-LLLMRIFFKNCRNLDD 244
           P  P+Q+ H  C Q+P IL  LL  ++ +N +NL +
Sbjct: 204 PQLPTQNIHQLCMQNPQILATLLQNMYLQNMQNLQN 239


>U64609-3|AAB04600.1|  264|Caenorhabditis elegans Patterned
           expression site protein 1 protein.
          Length = 264

 Score = 31.1 bits (67), Expect = 0.40
 Identities = 14/36 (38%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
 Frame = -1

Query: 348 PHTPSQHSHLCCTQSPFIL-LLLMRIFFKNCRNLDD 244
           P  P+Q+ H  C Q+P IL  LL  ++ +N +NL +
Sbjct: 204 PQLPTQNIHQLCMQNPQILATLLQNMYLQNMQNLQN 239


>U80440-3|AAK21470.2|  380|Caenorhabditis elegans Hypothetical
           protein T21E12.2 protein.
          Length = 380

 Score = 30.3 bits (65), Expect = 0.70
 Identities = 15/48 (31%), Positives = 23/48 (47%)
 Frame = -3

Query: 454 HHMSIPFQTRTSQLLCCHFQTSSNIFXPYSIHSRYSTHPIATFASLLH 311
           H M + F      LL    QT+     P+S+H  +S  P+  F S++H
Sbjct: 332 HSMLLLFLYHFFFLLALLLQTNIRTHLPFSLHFLHSIPPLGVFFSVIH 379


>U00046-1|AAC47044.3| 2560|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 152, isoform a protein.
          Length = 2560

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 284 NNSRMKGDCVQQRCECCDGVCGVT 355
           +N   +G+CV  +C C  G  G T
Sbjct: 319 SNCNQRGECVHGKCHCAPGFTGRT 342


>AB206836-1|BAD91087.1| 2502|Caenorhabditis elegans Ten-1S protein.
          Length = 2502

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 284 NNSRMKGDCVQQRCECCDGVCGVT 355
           +N   +G+CV  +C C  G  G T
Sbjct: 261 SNCNQRGECVHGKCHCAPGFTGRT 284


>AB206835-1|BAD91086.1| 2684|Caenorhabditis elegans Ten-1L protein.
          Length = 2684

 Score = 27.5 bits (58), Expect = 5.0
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +2

Query: 284 NNSRMKGDCVQQRCECCDGVCGVT 355
           +N   +G+CV  +C C  G  G T
Sbjct: 443 SNCNQRGECVHGKCHCAPGFTGRT 466


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,042,881
Number of Sequences: 27780
Number of extensions: 190100
Number of successful extensions: 526
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 526
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)