Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0420
         (459 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    23   2.1  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   4.8  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    21   4.8  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   4.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.4  

>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 9/26 (34%), Positives = 16/26 (61%)
 Frame = +3

Query: 324 ANVAMGCVE*REWIEYGXNMLEEV*K 401
           +++A+GC     + EYG N +E + K
Sbjct: 326 SDLAIGCWNSEHFFEYGGNNIEIIVK 351


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 3   HAKSVVTTFGLNIXPSRAPFRNAR*GTSFQKKKK 104
           H K +  TF LN+  S     NA   +  +K +K
Sbjct: 137 HRKLIAPTFHLNVLKSFIDLFNANARSVVEKMRK 170


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 303 PFILLLLMRIFFKNC 259
           PF  + L+R F +NC
Sbjct: 24  PFFTMYLVRAFCRNC 38


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 303 PFILLLLMRIFFKNC 259
           PF  + L+R F +NC
Sbjct: 472 PFFTMYLVRAFCRNC 486


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 10/35 (28%), Positives = 16/35 (45%)
 Frame = -2

Query: 410 LLPLSDFL*HIXSVFYPFSLLHTPHRNIRISAARN 306
           + PLSDF+ H      P   L    R++ +   +N
Sbjct: 184 IAPLSDFVIHRSPELVPMPTLKGDGRHMEVIKIKN 218


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,475
Number of Sequences: 438
Number of extensions: 2559
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)