Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0417
         (765 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    25   0.88 
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.7  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.2  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.2  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.2  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.2  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.2  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 24.6 bits (51), Expect = 0.88
 Identities = 11/35 (31%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
 Frame = +1

Query: 46  FEPLQNITHYITLFFEVRNILSS-LFNPISLILRS 147
           F   Q++ HY+ +FF V N++   L + + L+L++
Sbjct: 516 FNNYQSLAHYLRVFFTVFNVVHCYLASELVLMLKN 550



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -1

Query: 426  SQRKKLHLHILFRLYLNVDLLTDKYYTC 343
            S  K + LH+++  +L +    D +Y C
Sbjct: 986  SSEKIVWLHLVYISFLGIICAADVFYIC 1013


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.2 bits (45), Expect = 4.7
 Identities = 8/13 (61%), Positives = 9/13 (69%)
 Frame = -1

Query: 735 KLYRKKLSSLWHS 697
           K  R KL S+WHS
Sbjct: 163 KKIRSKLGSIWHS 175


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = +2

Query: 98  VIFFHLCLIQYLLFF 142
           VI FHL L   LL+F
Sbjct: 45  VIIFHLILFAVLLYF 59


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 485 VTVTKCGIFFVETLICLFL 541
           V+V KC +FFV  L  L +
Sbjct: 302 VSVWKCLLFFVSVLFILLV 320


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 485 VTVTKCGIFFVETLICLFL 541
           V+V KC +FFV  L  L +
Sbjct: 302 VSVWKCLLFFVSVLFILLV 320


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 485 VTVTKCGIFFVETLICLFL 541
           V+V KC +FFV  L  L +
Sbjct: 302 VSVWKCLLFFVSVLFILLV 320


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 485 VTVTKCGIFFVETLICLFL 541
           V+V KC +FFV  L  L +
Sbjct: 302 VSVWKCLLFFVSVLFILLV 320


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 169,555
Number of Sequences: 336
Number of extensions: 3654
Number of successful extensions: 14
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20546262
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)