Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0416
(765 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81534-4|CAB04345.1| 277|Caenorhabditis elegans Hypothetical pr... 44 9e-05
AF077534-7|AAK71376.1| 319|Caenorhabditis elegans Prion-like-(q... 44 9e-05
Z37093-2|CAA85464.1| 218|Caenorhabditis elegans Hypothetical pr... 42 6e-04
L16622-5|ABC71836.1| 263|Caenorhabditis elegans Hypothetical pr... 42 6e-04
L16622-4|AAA27914.1| 323|Caenorhabditis elegans Hypothetical pr... 42 6e-04
Z32683-12|CAA83624.2| 186|Caenorhabditis elegans Hypothetical p... 38 0.008
AL034393-2|CAA22309.1| 220|Caenorhabditis elegans Hypothetical ... 36 0.032
Z37093-1|CAA85467.1| 264|Caenorhabditis elegans Hypothetical pr... 34 0.13
Z82068-1|CAB04897.1| 149|Caenorhabditis elegans Hypothetical pr... 30 2.1
AF016449-4|AAG23998.3| 330|Caenorhabditis elegans Serpentine re... 30 2.1
Z70782-11|CAA94848.1| 487|Caenorhabditis elegans Hypothetical p... 29 3.6
Z70781-9|CAA94837.1| 487|Caenorhabditis elegans Hypothetical pr... 29 3.6
U00067-8|AAK20077.1| 140|Caenorhabditis elegans Ribosomal prote... 29 3.6
Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical pr... 28 6.3
AC024791-24|AAF60656.1| 627|Caenorhabditis elegans Hypothetical... 28 6.3
AF016446-13|AAC24172.1| 349|Caenorhabditis elegans Seven tm rec... 28 8.4
>Z81534-4|CAB04345.1| 277|Caenorhabditis elegans Hypothetical
protein F37H8.5 protein.
Length = 277
Score = 44.4 bits (100), Expect = 9e-05
Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Frame = +1
Query: 508 LDVTLVPYGKATTKEINGKYIFSCQHGEEECYANKIHSCSIEAVTNMTKAVKFTTCM--- 678
+++ LVP+G A E +G CQHGEEEC NK C I+++ + + + +C+
Sbjct: 109 VNIELVPFGNAKVLE-DGT--IKCQHGEEECSINKFEGCFIDSMQDQS-PLPTLSCIEES 164
Query: 679 ITDNNDADEALQRCSKSMNIDSD 747
+ + +A+Q+C + + I D
Sbjct: 165 LQKKVEFADAVQQCFEKLQIGGD 187
Score = 33.1 bits (72), Expect = 0.22
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 398 HKQDKVKVRVYYEALCPDSKYFFVKNLAPVTEK 496
H Q K+ + V EALCPD + F K L P+ K
Sbjct: 72 HNQ-KINITVLIEALCPDCQNFLTKQLYPIVFK 103
>AF077534-7|AAK71376.1| 319|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 48
protein.
Length = 319
Score = 44.4 bits (100), Expect = 9e-05
Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Frame = +1
Query: 508 LDVTLVPYGKATTKEINGKYIFSCQHGEEECYANKIHSCSIEAVTNMTKAVKFTTCMITD 687
L + LVP+G + +G FSC HG++EC AN++ SC I+ + + A+ F C +
Sbjct: 173 LILELVPWGNSRIMR-DGS--FSCNHGQKECDANRLQSCVID-ILKVKGALPFIVCFERN 228
Query: 688 --NNDADEALQRCSKSMNIDSDPISNC 762
+ + A+Q CS + I C
Sbjct: 229 IQHYGVEHAMQTCSAFIRSQYRQIRQC 255
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 395 KHKQDKVKVRVYYEALCPDSKYFFVKNLAPV 487
+H++ +K+ + YEALCP + F L V
Sbjct: 135 RHRRQPIKITLIYEALCPYCQKFIANQLGSV 165
>Z37093-2|CAA85464.1| 218|Caenorhabditis elegans Hypothetical
protein ZK669.3 protein.
Length = 218
Score = 41.5 bits (93), Expect = 6e-04
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Frame = +1
Query: 526 PYGKATT---KEINGKYIFSCQHGEEECYANKIHSCSIEAVTNMTKAVKFTTCM 678
PYG TT E + C HG EC N++ +C IEA+ N ++ TC+
Sbjct: 71 PYGIKTTCVDSESADDVVCDCHHGNRECLLNQLQACVIEALPNFEDYMEVVTCI 124
>L16622-5|ABC71836.1| 263|Caenorhabditis elegans Hypothetical
protein C02D5.2b protein.
Length = 263
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/85 (23%), Positives = 41/85 (48%)
Frame = +1
Query: 508 LDVTLVPYGKATTKEINGKYIFSCQHGEEECYANKIHSCSIEAVTNMTKAVKFTTCMITD 687
+++ ++P+GKA E + CQHG EC N++ +C I+ + + CM
Sbjct: 113 IELNVIPFGKARCTEKGNDFECQCQHGPTECQINQLMNCVIDRFGFPHRYLPGVLCM-QG 171
Query: 688 NNDADEALQRCSKSMNIDSDPISNC 762
DEA++ +++ + + + C
Sbjct: 172 KYSLDEAMKCVTENYPSEYERMREC 196
>L16622-4|AAA27914.1| 323|Caenorhabditis elegans Hypothetical
protein C02D5.2a protein.
Length = 323
Score = 41.5 bits (93), Expect = 6e-04
Identities = 20/85 (23%), Positives = 41/85 (48%)
Frame = +1
Query: 508 LDVTLVPYGKATTKEINGKYIFSCQHGEEECYANKIHSCSIEAVTNMTKAVKFTTCMITD 687
+++ ++P+GKA E + CQHG EC N++ +C I+ + + CM
Sbjct: 173 IELNVIPFGKARCTEKGNDFECQCQHGPTECQINQLMNCVIDRFGFPHRYLPGVLCM-QG 231
Query: 688 NNDADEALQRCSKSMNIDSDPISNC 762
DEA++ +++ + + + C
Sbjct: 232 KYSLDEAMKCVTENYPSEYERMREC 256
>Z32683-12|CAA83624.2| 186|Caenorhabditis elegans Hypothetical
protein R07E5.4 protein.
Length = 186
Score = 37.9 bits (84), Expect = 0.008
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Frame = +1
Query: 505 VLDVTLVPYGKAT-TKEINGKYIFSCQHGEEECYANKIHSCSI 630
++++ +VP+GK T + N + +C HG EC N++ +C+I
Sbjct: 50 IMNLQIVPFGKGDCTYDYNRNFHCTCMHGATECDLNRLQNCAI 92
>AL034393-2|CAA22309.1| 220|Caenorhabditis elegans Hypothetical
protein Y18D10A.2 protein.
Length = 220
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +1
Query: 508 LDVTLVPYGKATTKEINGKYIFSCQHGEEECYANKIHSCS 627
LD VP G +++GKY+ C HG EC NK+ CS
Sbjct: 75 LDFHAVPTGG---HQVDGKYVNRCLHGALECALNKLQMCS 111
>Z37093-1|CAA85467.1| 264|Caenorhabditis elegans Hypothetical
protein ZK669.2 protein.
Length = 264
Score = 33.9 bits (74), Expect = 0.13
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = +1
Query: 493 KAFRVLDVTLVPYGKATTKEINGKYI-FSCQHGEEECYANKIHSCSIEAVTNMTKAVKFT 669
+A +++T P+G A+ + I +CQHG EC N + +C I + +
Sbjct: 103 QASSTINITYHPFGLASCRRSAETGIRCNCQHGPAECQLNMLQACVISTLQVPQLYLPIV 162
Query: 670 TCMITDNNDADEALQRC 720
CM N A+ C
Sbjct: 163 NCM-QGKNKFSSAVDDC 178
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/39 (28%), Positives = 22/39 (56%)
Frame = +2
Query: 383 DKYNKHKQDKVKVRVYYEALCPDSKYFFVKNLAPVTEKL 499
D+ ++ K + + + E+LCPD+ +F ++ PV L
Sbjct: 64 DQASRAKTPPINIEFFGESLCPDTTRYFRNHIMPVWTSL 102
>Z82068-1|CAB04897.1| 149|Caenorhabditis elegans Hypothetical
protein W04A4.3 protein.
Length = 149
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 547 KEINGKYIFSCQHGEEECYANKIHSCSIEAVTNMT 651
K+ NG + +C++G EC NK+ C+ + N+T
Sbjct: 83 KKGNGTAVATCENGWLECQLNKLQCCTKKYSRNVT 117
>AF016449-4|AAG23998.3| 330|Caenorhabditis elegans Serpentine
receptor, class t protein16 protein.
Length = 330
Score = 29.9 bits (64), Expect = 2.1
Identities = 26/94 (27%), Positives = 40/94 (42%)
Frame = -2
Query: 461 NILSQDIEPHSTLAPSLYPACACYIYHLRAPICRYLRSLKIELQVYLVLVEKTAT*SNSK 282
N +S +P+ PS+Y + Y + IC L I VYL A+ SK
Sbjct: 190 NPMSWFFDPNVGKDPSIYISTIHYFNNFSVIICTVLFYGYIAY-VYLKESRSIASKQLSK 248
Query: 281 AQARLFCIYAVIECHFHSLKSFEHFIKLFLSRSD 180
+Q + + + C FH + + + FLS SD
Sbjct: 249 SQISIL-LQSFFFCFFHVITAIAYIAMEFLSASD 281
>Z70782-11|CAA94848.1| 487|Caenorhabditis elegans Hypothetical
protein F57A8.7 protein.
Length = 487
Score = 29.1 bits (62), Expect = 3.6
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Frame = +2
Query: 239 GILSLHRYRIIVLVLLSLIMWQFFRLIPDKPVALFSESVDTDILELEDDKYNKHKQDKVK 418
GILSLH + + L M F LI + ES T I + E ++YN K++ K
Sbjct: 177 GILSLHSNNAPAFLGIVLTMIGFVSLIVLFEEEIAEESDKTAIADFE-NQYNTVKEEYPK 235
Query: 419 VRVYYEALCPDSKYFFVKNLAPVT-EKLSEF*M*L*FLMAKRRPKKSTESTYFHVSMV 589
+ +C ++ FV+N ++ E L+ + + + ++ S +TY +
Sbjct: 236 SDIVAMLICMLTR--FVQNFMQISIETLAPAMLMMMYFQTRQEAVASMATTYLTTGFI 291
>Z70781-9|CAA94837.1| 487|Caenorhabditis elegans Hypothetical
protein F57A8.7 protein.
Length = 487
Score = 29.1 bits (62), Expect = 3.6
Identities = 29/118 (24%), Positives = 52/118 (44%), Gaps = 1/118 (0%)
Frame = +2
Query: 239 GILSLHRYRIIVLVLLSLIMWQFFRLIPDKPVALFSESVDTDILELEDDKYNKHKQDKVK 418
GILSLH + + L M F LI + ES T I + E ++YN K++ K
Sbjct: 177 GILSLHSNNAPAFLGIVLTMIGFVSLIVLFEEEIAEESDKTAIADFE-NQYNTVKEEYPK 235
Query: 419 VRVYYEALCPDSKYFFVKNLAPVT-EKLSEF*M*L*FLMAKRRPKKSTESTYFHVSMV 589
+ +C ++ FV+N ++ E L+ + + + ++ S +TY +
Sbjct: 236 SDIVAMLICMLTR--FVQNFMQISIETLAPAMLMMMYFQTRQEAVASMATTYLTTGFI 291
>U00067-8|AAK20077.1| 140|Caenorhabditis elegans Ribosomal protein,
small subunitprotein 12 protein.
Length = 140
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +1
Query: 523 VPYGKATTKEINGKYIFSCQHGEEECYANKIHSCSIEAVTN 645
+P K K+I G+Y C++ ++E A K+ CS VTN
Sbjct: 82 IPLIKVADKKIIGEYCGLCKY-DKEGKARKVVGCSSAVVTN 121
>Z68106-5|CAA92129.1| 557|Caenorhabditis elegans Hypothetical
protein F41E7.6 protein.
Length = 557
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -2
Query: 443 IEPHSTLAPSLYPACACYIYHLRAPICRYLRSLKIELQVYLVLVEKTAT 297
++ H+ LAP+ A YH R +RSL +++ YL E +AT
Sbjct: 402 LKTHNKLAPTYETASTRMFYHGRT---ETVRSLTTDMEKYLTACENSAT 447
>AC024791-24|AAF60656.1| 627|Caenorhabditis elegans Hypothetical
protein Y47G6A.4 protein.
Length = 627
Score = 28.3 bits (60), Expect = 6.3
Identities = 13/33 (39%), Positives = 20/33 (60%), Gaps = 1/33 (3%)
Frame = +2
Query: 386 KYNKHKQ-DKVKVRVYYEALCPDSKYFFVKNLA 481
+YN++ Q DK + YY +CPD K F + +A
Sbjct: 67 RYNQNDQADKDIMTRYYHGMCPDLKQKFEREVA 99
>AF016446-13|AAC24172.1| 349|Caenorhabditis elegans Seven tm
receptor protein 211 protein.
Length = 349
Score = 27.9 bits (59), Expect = 8.4
Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Frame = -2
Query: 293 SNSKAQARLFCIYAVIECHFH--SLKSFE-HFIKLFLSRSDHSQPLILSILKKYVIILLI 123
S+SK +L+ I AVI C F+ SL F HF + S Q ++ S K V+I LI
Sbjct: 80 SSSKVNKKLWEILAVIYCGFYGSSLAIFSIHFAYRYWVVSGTHQTVLNSFHKTTVLIWLI 139
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,362,463
Number of Sequences: 27780
Number of extensions: 296418
Number of successful extensions: 724
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 724
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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