Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0416
         (765 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    22   5.4  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   5.4  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   5.4  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    22   5.4  
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              22   7.2  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   9.5  

>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 257 RYRIIVLVLLSLIMWQF 307
           R+  IV+++LSL+ W +
Sbjct: 2   RHNYIVILILSLLTWTY 18


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = +1

Query: 520 LVPYGKATTKEINGKYIFSCQHGEEECYAN--KIHSCSIEAVTNMTKAV--KFTTCMITD 687
           L  +  A   +I  K I   QH E E YAN  KI     + +T + + +  +    ++  
Sbjct: 314 LSAFDMARIIQITPKRIQYAQHKENELYANLMKIVHEKQQEITGLIQNIIQEMKNDVLLS 373

Query: 688 NND 696
           NND
Sbjct: 374 NND 376


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 18/63 (28%), Positives = 28/63 (44%), Gaps = 4/63 (6%)
 Frame = +1

Query: 520 LVPYGKATTKEINGKYIFSCQHGEEECYAN--KIHSCSIEAVTNMTKAV--KFTTCMITD 687
           L  +  A   +I  K I   QH E E YAN  KI     + +T + + +  +    ++  
Sbjct: 352 LSAFDMARIIQITPKRIQYAQHKENELYANLMKIVHEKQQEITGLIQNIIQEMKNDVLLS 411

Query: 688 NND 696
           NND
Sbjct: 412 NND 414


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +2

Query: 257 RYRIIVLVLLSLIMWQF 307
           R+  IV+++LSL+ W +
Sbjct: 2   RHNYIVILILSLLTWTY 18


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 21.8 bits (44), Expect = 7.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 526 PYGKATTKEINGKYIFSCQHGEEECYANK 612
           P  K   K +  + +F   +GEEE Y  K
Sbjct: 27  PRRKKNKKPLPTECVFCRNNGEEEAYYRK 55


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = +1

Query: 610 KIHSCSIEAVTNMTKA 657
           ++HS +IEAVT   KA
Sbjct: 130 EVHSGNIEAVTTKEKA 145


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,925
Number of Sequences: 438
Number of extensions: 3203
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 23911269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)