Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0415
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    23   2.6  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   2.6  
EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   3.4  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    22   4.5  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     21   7.8  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 161 SIGTCSLINWCSEVQLFDDFAR 96
           S+  C +++ CS +Q  + FAR
Sbjct: 374 SLPGCHMVDSCSNIQTGEQFAR 395


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -1

Query: 161 SIGTCSLINWCSEVQLFDDFAR 96
           S+  C +++ CS +Q  + FAR
Sbjct: 381 SLPGCHMVDSCSNIQTGEQFAR 402


>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 10/37 (27%), Positives = 22/37 (59%)
 Frame = +3

Query: 585 FFNEFYDSIIASVRLFCFNVNGLPTISNVLRYELYDV 695
           FF+   D+   ++ L C+ ++   TI + LR+E+ ++
Sbjct: 295 FFSAGNDTTSITLALTCYELSLNKTIQDRLRHEVTEI 331


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -3

Query: 282 IHKCLLYTDEYLHCSNAQVLQVILQ 208
           IH+ + + +EY H S   V ++I Q
Sbjct: 319 IHRLVYFQNEYEHPSEEDVKRIINQ 343


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 15/44 (34%), Positives = 20/44 (45%)
 Frame = -2

Query: 460 GTTFFTVL*TKEYLSNYNEPRKCNGHQICLVSQFHWRGSSHIIV 329
           GT    VL  K Y  + N P   +GH   +V+    R  SH+ V
Sbjct: 514 GTVVEMVLIDKGYAYDANHPFHLHGHSFRVVAM--ERVGSHVNV 555


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,457
Number of Sequences: 336
Number of extensions: 3881
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)