Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0415
         (734 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41009-3|AAO44916.1|  353|Caenorhabditis elegans Hypothetical pr...    91   1e-18
U41009-2|AAA82279.1|  404|Caenorhabditis elegans Hypothetical pr...    91   1e-18
Z81485-1|CAB03975.1|  403|Caenorhabditis elegans Hypothetical pr...    88   5e-18
U41009-4|AAA82280.1|  404|Caenorhabditis elegans Hypothetical pr...    87   9e-18
AL110479-11|CAB54357.1|  363|Caenorhabditis elegans Hypothetical...    87   9e-18
AL110479-10|CAD56249.1|  345|Caenorhabditis elegans Hypothetical...    87   9e-18
U56963-10|AAM97949.1|  353|Caenorhabditis elegans Temporarily as...    81   6e-16
U56963-9|AAB38126.2|  404|Caenorhabditis elegans Temporarily ass...    81   6e-16
U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical pr...    28   6.0  
U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AF016415-7|AAW88412.1|  296|Caenorhabditis elegans Serpentine re...    28   6.0  

>U41009-3|AAO44916.1|  353|Caenorhabditis elegans Hypothetical
           protein C06E7.3b protein.
          Length = 353

 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 38/68 (55%), Positives = 51/68 (75%)
 Frame = +3

Query: 3   EPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIYQRTSTYGHFGRAGF 182
           +PLS+ VF +GTS  +++ LL+IV  NFDLRPGKI+K L+L+ PIY+ T+  GHFG   F
Sbjct: 263 KPLSVMVFSFGTSALSEEDLLTIVNDNFDLRPGKIIKNLDLKRPIYEPTAENGHFGHNNF 322

Query: 183 PWESPKPL 206
           PWE P+ L
Sbjct: 323 PWEQPRNL 330


>U41009-2|AAA82279.1|  404|Caenorhabditis elegans Hypothetical
           protein C06E7.3a protein.
          Length = 404

 Score = 90.6 bits (215), Expect = 1e-18
 Identities = 38/68 (55%), Positives = 51/68 (75%)
 Frame = +3

Query: 3   EPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIYQRTSTYGHFGRAGF 182
           +PLS+ VF +GTS  +++ LL+IV  NFDLRPGKI+K L+L+ PIY+ T+  GHFG   F
Sbjct: 314 KPLSVMVFSFGTSALSEEDLLTIVNDNFDLRPGKIIKNLDLKRPIYEPTAENGHFGHNNF 373

Query: 183 PWESPKPL 206
           PWE P+ L
Sbjct: 374 PWEQPRNL 381


>Z81485-1|CAB03975.1|  403|Caenorhabditis elegans Hypothetical
           protein C49F5.1 protein.
          Length = 403

 Score = 88.2 bits (209), Expect = 5e-18
 Identities = 36/68 (52%), Positives = 52/68 (76%)
 Frame = +3

Query: 3   EPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIYQRTSTYGHFGRAGF 182
           +P+S+ V+ +GTS  T ++L  IV+ +FDL PGKI+KEL+L+ PIY++T+  GHFG + F
Sbjct: 313 KPISVLVYAFGTSPLTDEELHQIVEDSFDLTPGKIIKELDLKRPIYEKTAENGHFGHSEF 372

Query: 183 PWESPKPL 206
           PWE PK L
Sbjct: 373 PWEQPKAL 380


>U41009-4|AAA82280.1|  404|Caenorhabditis elegans Hypothetical
           protein C06E7.1a protein.
          Length = 404

 Score = 87.4 bits (207), Expect = 9e-18
 Identities = 37/71 (52%), Positives = 51/71 (71%)
 Frame = +3

Query: 3   EPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIYQRTSTYGHFGRAGF 182
           +PLS+ VF +GTS   + +LL IV  NFDLRPG I+K+L+L+ PIY+ T+  GHFG   F
Sbjct: 314 KPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDLKKPIYEPTAENGHFGHNEF 373

Query: 183 PWESPKPLIVE 215
           PWE P+ L ++
Sbjct: 374 PWEQPRHLQID 384


>AL110479-11|CAB54357.1|  363|Caenorhabditis elegans Hypothetical
           protein Y105C5B.12b protein.
          Length = 363

 Score = 87.4 bits (207), Expect = 9e-18
 Identities = 37/71 (52%), Positives = 51/71 (71%)
 Frame = +3

Query: 3   EPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIYQRTSTYGHFGRAGF 182
           +PLS+ VF +GTS   + +LL IV  NFDLRPG I+K+L+L+ PIY+ T+  GHFG   F
Sbjct: 273 KPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDLKKPIYEPTAENGHFGHNEF 332

Query: 183 PWESPKPLIVE 215
           PWE P+ L ++
Sbjct: 333 PWEQPRHLQID 343


>AL110479-10|CAD56249.1|  345|Caenorhabditis elegans Hypothetical
           protein Y105C5B.12a protein.
          Length = 345

 Score = 87.4 bits (207), Expect = 9e-18
 Identities = 37/71 (52%), Positives = 51/71 (71%)
 Frame = +3

Query: 3   EPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIYQRTSTYGHFGRAGF 182
           +PLS+ VF +GTS   + +LL IV  NFDLRPG I+K+L+L+ PIY+ T+  GHFG   F
Sbjct: 255 KPLSVMVFSFGTSALNEGELLKIVNDNFDLRPGMIIKDLDLKKPIYEPTAENGHFGHNEF 314

Query: 183 PWESPKPLIVE 215
           PWE P+ L ++
Sbjct: 315 PWEQPRHLQID 325


>U56963-10|AAM97949.1|  353|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 32, isoform b protein.
          Length = 353

 Score = 81.4 bits (192), Expect = 6e-16
 Identities = 35/71 (49%), Positives = 48/71 (67%)
 Frame = +3

Query: 3   EPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIYQRTSTYGHFGRAGF 182
           +PLS+ VF +GTS   + +LL IV  NFDLRPG I+K L+L+  IY+ T+  GHFG   F
Sbjct: 263 KPLSVMVFSFGTSALNEAELLKIVNDNFDLRPGMIIKNLDLKRAIYEPTAENGHFGHNDF 322

Query: 183 PWESPKPLIVE 215
           PWE  + L ++
Sbjct: 323 PWEQARKLKID 333


>U56963-9|AAB38126.2|  404|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 32, isoform a protein.
          Length = 404

 Score = 81.4 bits (192), Expect = 6e-16
 Identities = 35/71 (49%), Positives = 48/71 (67%)
 Frame = +3

Query: 3   EPLSITVFDYGTSHKTQQQLLSIVQKNFDLRPGKIVKELNLRAPIYQRTSTYGHFGRAGF 182
           +PLS+ VF +GTS   + +LL IV  NFDLRPG I+K L+L+  IY+ T+  GHFG   F
Sbjct: 314 KPLSVMVFSFGTSALNEAELLKIVNDNFDLRPGMIIKNLDLKRAIYEPTAENGHFGHNDF 373

Query: 183 PWESPKPLIVE 215
           PWE  + L ++
Sbjct: 374 PWEQARKLKID 384


>U00065-7|AAL02474.1| 1090|Caenorhabditis elegans Hypothetical
           protein D1044.2c protein.
          Length = 1090

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 280 YVCHCSEGAASPVS 321
           Y CHCSEG   P+S
Sbjct: 331 YCCHCSEGTCHPIS 344


>U00065-6|AAL02472.1| 1051|Caenorhabditis elegans Hypothetical
           protein D1044.2a protein.
          Length = 1051

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = +1

Query: 280 YVCHCSEGAASPVS 321
           Y CHCSEG   P+S
Sbjct: 331 YCCHCSEGTCHPIS 344


>AF016415-7|AAW88412.1|  296|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 33 protein.
          Length = 296

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 18/47 (38%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
 Frame = +3

Query: 564 FYTLPR--IFFNEFYDSIIASVRLFCFNVNGLPT--ISNVLRYELYD 692
           F+T+ +  IFF+    SI+ S++LF +N NG  +  IS   R  L D
Sbjct: 172 FWTIHKSIIFFSILVFSILISIKLFIWNTNGQSSNQISKANRLALLD 218


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,710,365
Number of Sequences: 27780
Number of extensions: 353908
Number of successful extensions: 761
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)