Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0414
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            27   0.75 
M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   1.7  
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   2.3  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   7.0  
DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein O-fucosylt...    23   7.0  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 26.6 bits (56), Expect = 0.75
 Identities = 13/40 (32%), Positives = 19/40 (47%)
 Frame = -1

Query: 310  HQDHHRGPAPRHSEKHSASKPTELSACCRERSETPRHRNK 191
            HQD  RGP  R ++ H+  +P  L     E      HR++
Sbjct: 1262 HQDP-RGPQGRSTDYHATQQPLPLPGLASEMQPQQLHRSQ 1300


>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 25.4 bits (53), Expect = 1.7
 Identities = 20/55 (36%), Positives = 25/55 (45%)
 Frame = +2

Query: 302 VLMSLLTALHRPEGDRRGCEPRYPGHPQPRRQSRLAKCPAMVKLQLFGQQRRESP 466
           VL SLL A  +  G +    PR P  P PRR S  A+     + Q   Q  +E P
Sbjct: 183 VLNSLLAA--KVGGGQPSASPRQPPTPLPRRSS--AQPQQQQQQQQRNQHEQEQP 233


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -1

Query: 289 PAPRHSEKHSASKPTELSACCRERSETPRHRNKP 188
           P PR + +  AS+PT       +R   P  R++P
Sbjct: 643 PPPRTNSQSQASEPTPALPPRADRDSKPSSRDRP 676


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/20 (50%), Positives = 12/20 (60%), Gaps = 1/20 (5%)
 Frame = -1

Query: 310 HQDHHRGPAPRHS-EKHSAS 254
           H  HH    P HS ++HSAS
Sbjct: 183 HHHHHHHHHPHHSQQQHSAS 202


>DQ139945-1|ABA29466.1|  399|Anopheles gambiae protein
           O-fucosyltransferase 1 protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 430 APALWPAAPRVS 465
           AP+LWP A R+S
Sbjct: 102 APSLWPPAERIS 113


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,434
Number of Sequences: 2352
Number of extensions: 11825
Number of successful extensions: 41
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)