Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0414
(700 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembr... 31 3.0
AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembr... 31 3.0
AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembr... 31 3.0
AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein pr... 31 3.0
AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein. 31 3.0
AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isof... 31 3.0
AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isof... 31 3.0
AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein. 31 3.0
AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein. 31 3.0
AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein. 31 3.0
BC008833-1|AAH08833.1| 425|Homo sapiens coiled-coil domain cont... 31 5.2
AK023392-1|BAB14557.1| 193|Homo sapiens protein ( Homo sapiens ... 31 5.2
AK000298-1|BAA91065.1| 425|Homo sapiens protein ( Homo sapiens ... 31 5.2
X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein. 30 9.1
X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein. 30 9.1
X60152-1|CAB52138.1| 395|Homo sapiens zinc finger 2.2 protein. 30 9.1
U82939-1|AAC98530.1| 815|Homo sapiens p53 binding protein protein. 30 9.1
M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 prot... 30 9.1
BC060884-1|AAH60884.1| 1045|Homo sapiens topoisomerase I binding... 30 9.1
BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetit... 30 9.1
BC009976-1|AAH09976.2| 381|Homo sapiens ZNF2 protein protein. 30 9.1
BC005068-1|AAH05068.2| 425|Homo sapiens zinc finger protein 2 p... 30 9.1
AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein. 30 9.1
AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetit... 30 9.1
AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetit... 30 9.1
AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetit... 30 9.1
AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetit... 30 9.1
AL353671-4|CAH71253.1| 980|Homo sapiens topoisomerase I binding... 30 9.1
AL353671-3|CAH71254.1| 1045|Homo sapiens topoisomerase I binding... 30 9.1
AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 9.1
AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein... 30 9.1
AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein... 30 9.1
AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein... 30 9.1
AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein... 30 9.1
AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein... 30 9.1
AF098300-1|AAD23379.1| 1045|Homo sapiens topoisomerase I-binding... 30 9.1
AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear... 30 9.1
AF038563-1|AAC05370.1| 1455|Homo sapiens membrane associated gua... 30 9.1
AC092835-3|AAX88982.1| 293|Homo sapiens unknown protein. 30 9.1
AB045733-1|BAB03715.1| 980|Homo sapiens RING-finger protein pro... 30 9.1
AB045732-1|BAB03714.1| 1045|Homo sapiens RING-finger protein pro... 30 9.1
AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein. 30 9.1
>AL592424-4|CAI16377.1| 962|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 962
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 278 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 373
PG+ V L LL LH P+ R+G EP P
Sbjct: 790 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 821
>AL592424-3|CAI16378.1| 930|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 930
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 278 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 373
PG+ V L LL LH P+ R+G EP P
Sbjct: 758 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 789
>AL592424-2|CAI16376.1| 922|Homo sapiens sema domain, transmembrane
domain (TM), and cytoplasmic domain, (semaphorin) 6C
protein.
Length = 922
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 278 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 373
PG+ V L LL LH P+ R+G EP P
Sbjct: 750 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 781
>AL122064-1|CAB59243.1| 294|Homo sapiens hypothetical protein
protein.
Length = 294
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 278 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 373
PG+ V L LL LH P+ R+G EP P
Sbjct: 122 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 153
>AF339154-1|AAL72100.1| 962|Homo sapiens semaphorin Y protein.
Length = 962
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 278 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 373
PG+ V L LL LH P+ R+G EP P
Sbjct: 790 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 821
>AF339153-1|AAL72099.1| 922|Homo sapiens semaphorin Y short isoform
2 protein.
Length = 922
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 278 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 373
PG+ V L LL LH P+ R+G EP P
Sbjct: 750 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 781
>AF339152-1|AAL72098.1| 930|Homo sapiens semaphorin Y short isoform
1 protein.
Length = 930
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 278 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 373
PG+ V L LL LH P+ R+G EP P
Sbjct: 758 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 789
>AF055020-1|AAC09365.1| 446|Homo sapiens unknown protein.
Length = 446
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 278 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 373
PG+ V L LL LH P+ R+G EP P
Sbjct: 274 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 305
>AB058772-1|BAB47498.1| 935|Homo sapiens KIAA1869 protein protein.
Length = 935
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 278 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 373
PG+ V L LL LH P+ R+G EP P
Sbjct: 763 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 794
>AB022434-1|BAB20670.1| 930|Homo sapiens semaphorin Y protein.
Length = 930
Score = 31.5 bits (68), Expect = 3.0
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +2
Query: 278 PGRRASVVVLMSLLTALHRPEGDRRGCEPRYP 373
PG+ V L LL LH P+ R+G EP P
Sbjct: 758 PGQAVEVTTLEELLRYLHGPQPPRKGAEPPAP 789
>BC008833-1|AAH08833.1| 425|Homo sapiens coiled-coil domain
containing 49 protein.
Length = 425
Score = 30.7 bits (66), Expect = 5.2
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 340 LRAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRE-RSETPRHRNKPSRP 179
L A Q R G ++H R + HS ASK + A R+ RS + R++ RP
Sbjct: 244 LTAEQKRGHGMKNHSRSRSSSHSPPRHASKKSTREAGSRDRRSRSLGRRSRSPRP 298
>AK023392-1|BAB14557.1| 193|Homo sapiens protein ( Homo sapiens
cDNA FLJ13330 fis, clone OVARC1001802. ).
Length = 193
Score = 30.7 bits (66), Expect = 5.2
Identities = 22/75 (29%), Positives = 34/75 (45%)
Frame = +2
Query: 230 ASAQLCRLRRRVFLAVPGRRASVVVLMSLLTALHRPEGDRRGCEPRYPGHPQPRRQSRLA 409
+S Q CR+R R + + G R S+ L T DRRG R GH + ++ +
Sbjct: 98 SSGQSCRIRHRTYSSALG-RGSLKKSPGLKTKRDTSVRDRRGDRHRGEGHVETEAETGVM 156
Query: 410 KCPAMVKLQLFGQQR 454
+ A +L+ G R
Sbjct: 157 RPQAQGRLEPPGAGR 171
>AK000298-1|BAA91065.1| 425|Homo sapiens protein ( Homo sapiens
cDNA FLJ20291 fis, clone HEP04788. ).
Length = 425
Score = 30.7 bits (66), Expect = 5.2
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -1
Query: 340 LRAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRE-RSETPRHRNKPSRP 179
L A Q R G ++H R + HS ASK + A R+ RS + R++ RP
Sbjct: 244 LTAEQKRGHGMKNHSRSRSSSHSPPRHASKKSTREAGSRDRRSRSLGRRSRSPRP 298
>X63753-1|CAA45282.1| 1523|Homo sapiens son-a protein.
Length = 1523
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+V ++ HR + K S+S+ + R RS TP R++ P RRS
Sbjct: 877 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 933
>X63071-1|CAA44793.1| 1179|Homo sapiens DBP-5 protein protein.
Length = 1179
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+V ++ HR + K S+S+ + R RS TP R++ P RRS
Sbjct: 740 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 796
>X60152-1|CAB52138.1| 395|Homo sapiens zinc finger 2.2 protein.
Length = 395
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 280 RHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRSPHHFHCSI 137
RH H+ KP + CRE + HR+ SR + S + CS+
Sbjct: 193 RHQRTHTGEKPYD----CRECGKAFSHRSSLSRHLMSHTGESPYECSV 236
>U82939-1|AAC98530.1| 815|Homo sapiens p53 binding protein protein.
Length = 815
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -1
Query: 337 RAVQSREQGHQDH-HRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+ SR Q H + H +K SK + R R + R++ WSRRS
Sbjct: 368 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 427
>M36428-1|AAA36624.1| 483|Homo sapiens protein ( Human son3 protein
gene, partial cds. ).
Length = 483
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+V ++ HR + K S+S+ + R RS TP R++ P RRS
Sbjct: 192 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 248
>BC060884-1|AAH60884.1| 1045|Homo sapiens topoisomerase I binding,
arginine/serine-rich protein.
Length = 1045
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -1
Query: 337 RAVQSREQGHQDH-HRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+ SR Q H + H +K SK + R R + R++ WSRRS
Sbjct: 598 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 657
>BC036187-1|AAH36187.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRER----SETPRHRNKPSRP 179
R + +E + R +PR + S S S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSHSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>BC009976-1|AAH09976.2| 381|Homo sapiens ZNF2 protein protein.
Length = 381
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 280 RHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRSPHHFHCSI 137
RH H+ KP + CRE + HR+ SR + S + CS+
Sbjct: 146 RHQRTHTGEKPYD----CRECGKAFSHRSSLSRHLMSHTGESPYECSV 189
>BC005068-1|AAH05068.2| 425|Homo sapiens zinc finger protein 2
protein.
Length = 425
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 280 RHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRSPHHFHCSI 137
RH H+ KP + CRE + HR+ SR + S + CS+
Sbjct: 190 RHQRTHTGEKPYD----CRECGKAFSHRSSLSRHLMSHTGESPYECSV 233
>AY026895-1|AAK07692.1| 2386|Homo sapiens NREBP protein.
Length = 2386
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+V ++ HR + K S+S+ + R RS TP R++ P RRS
Sbjct: 1844 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1900
>AL445686-4|CAI14682.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRER----SETPRHRNKPSRP 179
R + +E + R +PR + S S S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AL445686-3|CAI14683.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRER----SETPRHRNKPSRP 179
R + +E + R +PR + S S S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AL445648-3|CAH73090.1| 904|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 904
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRER----SETPRHRNKPSRP 179
R + +E + R +PR + S S S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AL445648-2|CAH73089.1| 913|Homo sapiens serine/arginine repetitive
matrix 1 protein.
Length = 913
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRER----SETPRHRNKPSRP 179
R + +E + R +PR + S S S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AL353671-4|CAH71253.1| 980|Homo sapiens topoisomerase I binding,
arginine/serine-rich protein.
Length = 980
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -1
Query: 337 RAVQSREQGHQDH-HRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+ SR Q H + H +K SK + R R + R++ WSRRS
Sbjct: 533 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 592
>AL353671-3|CAH71254.1| 1045|Homo sapiens topoisomerase I binding,
arginine/serine-rich protein.
Length = 1045
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -1
Query: 337 RAVQSREQGHQDH-HRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+ SR Q H + H +K SK + R R + R++ WSRRS
Sbjct: 598 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 657
>AF419855-1|AAP97290.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRER----SETPRHRNKPSRP 179
R + +E + R +PR + S S S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AF380184-1|AAL34502.1| 2426|Homo sapiens SON DNA binding protein
isoform F protein.
Length = 2426
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+V ++ HR + K S+S+ + R RS TP R++ P RRS
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1940
>AF380183-1|AAL34501.1| 2108|Homo sapiens SON DNA binding protein
isoform E protein.
Length = 2108
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+V ++ HR + K S+S+ + R RS TP R++ P RRS
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1940
>AF380181-1|AAL34499.1| 2325|Homo sapiens SON DNA binding protein
isoform C protein.
Length = 2325
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+V ++ HR + K S+S+ + R RS TP R++ P RRS
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1940
>AF380180-1|AAL34498.1| 2303|Homo sapiens SON DNA binding protein
isoform B protein.
Length = 2303
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+V ++ HR + K S+S+ + R RS TP R++ P RRS
Sbjct: 1884 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1940
>AF380179-1|AAL34497.1| 2140|Homo sapiens SON DNA binding protein
isoform A protein.
Length = 2140
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+V ++ HR + K S+S+ + R RS TP R++ P RRS
Sbjct: 1565 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1621
>AF098300-1|AAD23379.1| 1045|Homo sapiens topoisomerase I-binding RS
protein protein.
Length = 1045
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -1
Query: 337 RAVQSREQGHQDH-HRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+ SR Q H + H +K SK + R R + R++ WSRRS
Sbjct: 598 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 657
>AF048977-1|AAC09321.1| 820|Homo sapiens Ser/Arg-related nuclear
matrix protein protein.
Length = 820
Score = 29.9 bits (64), Expect = 9.1
Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 4/57 (7%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRER----SETPRHRNKPSRP 179
R + +E + R +PR + S S S RER S +PRHR K P
Sbjct: 154 RDKEEKESSREKRERSRSPRRRKSRSPSPRRRSSPVRRERKRSHSRSPRHRTKSRSP 210
>AF038563-1|AAC05370.1| 1455|Homo sapiens membrane associated
guanylate kinase 2 protein.
Length = 1455
Score = 29.9 bits (64), Expect = 9.1
Identities = 13/38 (34%), Positives = 18/38 (47%)
Frame = -1
Query: 292 GPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRP 179
GP KH KP ELSAC +++ R + + P
Sbjct: 1283 GPTWDIKRKHDVRKPKELSACGQKKQRLGEQRERSASP 1320
>AC092835-3|AAX88982.1| 293|Homo sapiens unknown protein.
Length = 293
Score = 29.9 bits (64), Expect = 9.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = -1
Query: 280 RHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRSPHHFHCSI 137
RH H+ KP + CRE + HR+ SR + S + CS+
Sbjct: 58 RHQRTHTGEKPYD----CRECGKAFSHRSSLSRHLMSHTGESPYECSV 101
>AB045733-1|BAB03715.1| 980|Homo sapiens RING-finger protein
protein.
Length = 980
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -1
Query: 337 RAVQSREQGHQDH-HRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+ SR Q H + H +K SK + R R + R++ WSRRS
Sbjct: 533 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 592
>AB045732-1|BAB03714.1| 1045|Homo sapiens RING-finger protein
protein.
Length = 1045
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/60 (28%), Positives = 24/60 (40%), Gaps = 1/60 (1%)
Frame = -1
Query: 337 RAVQSREQGHQDH-HRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+ SR Q H + H +K SK + R R + R++ WSRRS
Sbjct: 598 RSSDSRSQSRSGHDQKNHRKHHGKKRMKSKRSRSRESSRPRGRRDKKRSRTRDSSWSRRS 657
>AB028942-1|BAA82971.2| 2309|Homo sapiens KIAA1019 protein protein.
Length = 2309
Score = 29.9 bits (64), Expect = 9.1
Identities = 17/59 (28%), Positives = 26/59 (44%)
Frame = -1
Query: 337 RAVQSREQGHQDHHRGPAPRHSEKHSASKPTELSACCRERSETPRHRNKPSRPVWSRRS 161
R+V ++ HR + K S+S+ + R RS TP R++ P RRS
Sbjct: 1890 RSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV--RARSRTPSRRSRSHTPSRRRRS 1946
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,183,191
Number of Sequences: 237096
Number of extensions: 1868914
Number of successful extensions: 7437
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 6386
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7422
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8063224416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -