Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0413
         (728 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061353-1|AAL28901.1|  687|Drosophila melanogaster LD28117p pro...    30   2.8  
AE014298-2173|AAF48473.2|  687|Drosophila melanogaster CG9213-PA...    30   2.8  
L26502-1|AAB58976.1| 2764|Drosophila melanogaster neurofibromin ...    29   6.5  
L26501-1|AAB58975.1| 2802|Drosophila melanogaster neurofibromin ...    29   6.5  
L26500-1|AAB58977.1| 2802|Drosophila melanogaster neurofibromin ...    29   6.5  
AE014297-3891|AAF56543.3| 2802|Drosophila melanogaster CG8318-PB...    29   6.5  
AE014297-3890|AAX52994.1| 2764|Drosophila melanogaster CG8318-PD...    29   6.5  
AE014297-3889|AAN14067.2| 2746|Drosophila melanogaster CG8318-PC...    29   6.5  

>AY061353-1|AAL28901.1|  687|Drosophila melanogaster LD28117p
           protein.
          Length = 687

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 412 SPGMGRSRGFRGLEPGVKAPQPPR 341
           S   G SRG+R  +PG KAP PPR
Sbjct: 228 SSAQGSSRGWR--KPGAKAPSPPR 249


>AE014298-2173|AAF48473.2|  687|Drosophila melanogaster CG9213-PA
           protein.
          Length = 687

 Score = 30.3 bits (65), Expect = 2.8
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = -2

Query: 412 SPGMGRSRGFRGLEPGVKAPQPPR 341
           S   G SRG+R  +PG KAP PPR
Sbjct: 228 SSAQGSSRGWR--KPGAKAPSPPR 249


>L26502-1|AAB58976.1| 2764|Drosophila melanogaster neurofibromin
            protein.
          Length = 2764

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 141  FQLETFSQWFYTLLTCAVESNYALYV 218
            F+ E   +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710


>L26501-1|AAB58975.1| 2802|Drosophila melanogaster neurofibromin
            protein.
          Length = 2802

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 141  FQLETFSQWFYTLLTCAVESNYALYV 218
            F+ E   +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710


>L26500-1|AAB58977.1| 2802|Drosophila melanogaster neurofibromin
            protein.
          Length = 2802

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 141  FQLETFSQWFYTLLTCAVESNYALYV 218
            F+ E   +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710


>AE014297-3891|AAF56543.3| 2802|Drosophila melanogaster CG8318-PB,
            isoform B protein.
          Length = 2802

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 141  FQLETFSQWFYTLLTCAVESNYALYV 218
            F+ E   +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710


>AE014297-3890|AAX52994.1| 2764|Drosophila melanogaster CG8318-PD,
            isoform D protein.
          Length = 2764

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 141  FQLETFSQWFYTLLTCAVESNYALYV 218
            F+ E   +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710


>AE014297-3889|AAN14067.2| 2746|Drosophila melanogaster CG8318-PC,
            isoform C protein.
          Length = 2746

 Score = 29.1 bits (62), Expect = 6.5
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 141  FQLETFSQWFYTLLTCAVESNYALYV 218
            F+ E   +WFY L T A E+ +A+Y+
Sbjct: 1685 FRTEFLQKWFYVLPTVAYENVHAVYI 1710


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,821,353
Number of Sequences: 53049
Number of extensions: 818629
Number of successful extensions: 2208
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2208
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)