Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0412
         (775 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    27   0.22 
L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protei...    23   2.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   6.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   6.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   6.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   6.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    21   8.3  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 26.6 bits (56), Expect = 0.22
 Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
 Frame = +1

Query: 283 NMEKRFPYYVKEIRGVADGANVPF-YQLFLLQMDDLIGTINDNHVPR 420
           N E+  P Y+  I+GV D  ++P      +LQ + ++  I  N V +
Sbjct: 362 NCEELIPEYLNFIKGVVDSEDLPLNISREMLQQNKILKVIRKNLVKK 408


>L01617-1|AAA30097.1|   46|Tribolium castaneum zinc finger protein
           protein.
          Length = 46

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -2

Query: 498 KCILCVSKYSMLWVLEG 448
           KC +C   +S  W+L+G
Sbjct: 9   KCTICPKAFSRPWLLQG 25


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 665 HAQPTSAKAWKHSSHI 712
           H   +SAKA K+S HI
Sbjct: 545 HTDASSAKAVKNSDHI 560


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 665 HAQPTSAKAWKHSSHI 712
           H   +SAKA K+S HI
Sbjct: 545 HTDASSAKAVKNSDHI 560


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 665 HAQPTSAKAWKHSSHI 712
           H   +SAKA K+S HI
Sbjct: 545 HTDASSAKAVKNSDHI 560


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 665 HAQPTSAKAWKHSSHI 712
           H   +SAKA K+S HI
Sbjct: 545 HTDASSAKAVKNSDHI 560


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +2

Query: 158 FDVGRTFSSIIKSFISNYANLRD 226
           F +    +S++KS  S YA+L +
Sbjct: 318 FQIIELMTSVVKSLESRYADLNE 340


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,036
Number of Sequences: 336
Number of extensions: 4911
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)