Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0412
         (775 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY128492-1|AAM75085.1|  387|Drosophila melanogaster RH41996p pro...   102   6e-22
AE014298-1306|AAF46466.1|  387|Drosophila melanogaster CG12120-P...   102   6e-22
AE014298-2221|AAF48513.2|  793|Drosophila melanogaster CG8959-PA...    30   4.1  
BT024283-1|ABC86345.1|  818|Drosophila melanogaster IP13967p pro...    29   9.4  

>AY128492-1|AAM75085.1|  387|Drosophila melanogaster RH41996p
           protein.
          Length = 387

 Score =  102 bits (244), Expect = 6e-22
 Identities = 46/84 (54%), Positives = 58/84 (69%)
 Frame = +3

Query: 510 NHFYIMSAHIIPTPEDREHGAVEERFSSLCYAGHMPGYTMGYNENGMVFSINTLSPLLLK 689
           NH+Y + AHII      ++   EE F SLCYAGH+PGYTM +N +G+VFSINT+S  LL+
Sbjct: 147 NHYYFVVAHIISDKPQGKYNVKEEHFMSLCYAGHLPGYTMSHNHHGLVFSINTISAELLR 206

Query: 690 PGNTPRTFITRKLLSAKSFPDAER 761
            G TPR FITR LL+  +  DA R
Sbjct: 207 SGKTPRHFITRALLATSNVDDAFR 230



 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
 Frame = +1

Query: 256 RNAYDKTLANMEKRFPYYVKEIRGVADGANVPFYQLFLLQMDDLIGTINDNHVPR--NDT 429
           R  Y++TL +++  FP YV+E+ GVADGA V F++LFLL +D+++      H PR  N  
Sbjct: 61  RQIYNETLGSVKDSFPQYVRELEGVADGAEVEFHKLFLLHLDEILPQAL-KHQPRSKNQP 119

Query: 430 GGCSSVAFKNPQHTILGHTEDAFTET 507
            GCS++        +LGHTEDA TET
Sbjct: 120 TGCSTIIVNQKNCRLLGHTEDALTET 145



 Score = 60.5 bits (140), Expect = 3e-09
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +2

Query: 98  LGRRHAVPVIYVRGSHYEVGFDVGRTFSSIIKSFI 202
           L RR AVPV+Y RG+HYEVGFD+GRTF S+IK+F+
Sbjct: 7   LPRRQAVPVLYTRGTHYEVGFDMGRTFGSMIKNFL 41


>AE014298-1306|AAF46466.1|  387|Drosophila melanogaster CG12120-PA
           protein.
          Length = 387

 Score =  102 bits (244), Expect = 6e-22
 Identities = 46/84 (54%), Positives = 58/84 (69%)
 Frame = +3

Query: 510 NHFYIMSAHIIPTPEDREHGAVEERFSSLCYAGHMPGYTMGYNENGMVFSINTLSPLLLK 689
           NH+Y + AHII      ++   EE F SLCYAGH+PGYTM +N +G+VFSINT+S  LL+
Sbjct: 147 NHYYFVVAHIISDKPQGKYNVKEEHFMSLCYAGHLPGYTMSHNHHGLVFSINTISAELLR 206

Query: 690 PGNTPRTFITRKLLSAKSFPDAER 761
            G TPR FITR LL+  +  DA R
Sbjct: 207 SGKTPRHFITRALLATSNVDDAFR 230



 Score = 80.6 bits (190), Expect = 2e-15
 Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
 Frame = +1

Query: 256 RNAYDKTLANMEKRFPYYVKEIRGVADGANVPFYQLFLLQMDDLIGTINDNHVPR--NDT 429
           R  Y++TL +++  FP YV+E+ GVADGA V F++LFLL +D+++      H PR  N  
Sbjct: 61  RQIYNETLGSVKDSFPQYVRELEGVADGAEVEFHKLFLLHLDEILPQAL-KHQPRSKNQP 119

Query: 430 GGCSSVAFKNPQHTILGHTEDAFTET 507
            GCS++        +LGHTEDA TET
Sbjct: 120 TGCSTIIVNQKNCRLLGHTEDALTET 145



 Score = 60.5 bits (140), Expect = 3e-09
 Identities = 25/35 (71%), Positives = 31/35 (88%)
 Frame = +2

Query: 98  LGRRHAVPVIYVRGSHYEVGFDVGRTFSSIIKSFI 202
           L RR AVPV+Y RG+HYEVGFD+GRTF S+IK+F+
Sbjct: 7   LPRRQAVPVLYTRGTHYEVGFDMGRTFGSMIKNFL 41


>AE014298-2221|AAF48513.2|  793|Drosophila melanogaster CG8959-PA
           protein.
          Length = 793

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = +2

Query: 470 LYLDTQRMHLPKPKSLLHYVGAHHSNSRRQGARGSRGTVLV 592
           L+ D  + H PKP+SL +  G    + R+Q A    G+V V
Sbjct: 14  LFRDVSKGHYPKPQSLANVQGLSMLSDRQQPAPVESGSVTV 54


>BT024283-1|ABC86345.1|  818|Drosophila melanogaster IP13967p
           protein.
          Length = 818

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = +2

Query: 470 LYLDTQRMHLPKPKSLLHYVGAHHSNSRRQGARGSRGTV 586
           L+ D  + H PKP+SL +  G    + R+Q A    G+V
Sbjct: 39  LFRDVSKGHYPKPQSLANVQGLSMLSDRQQPAPVESGSV 77


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,254,338
Number of Sequences: 53049
Number of extensions: 931952
Number of successful extensions: 2059
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1954
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2057
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3581842374
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)