Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0412
         (775 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical p...    35   0.056
Z83316-9|CAN99655.1|  250|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    30   2.1  
AF036702-10|AAU05573.1|  164|Caenorhabditis elegans Hypothetical...    30   2.1  
Z81533-14|CAB04331.2|  707|Caenorhabditis elegans Hypothetical p...    29   2.8  
U40419-6|AAL02445.2|  408|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AC024877-2|AAF60905.2|  608|Caenorhabditis elegans Hypothetical ...    29   2.8  
AC024787-1|AAF60607.2|  469|Caenorhabditis elegans Hypothetical ...    29   2.8  
Z93381-5|CAB07608.2|  720|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z83218-4|CAB05690.2|  706|Caenorhabditis elegans Hypothetical pr...    29   4.9  
Z83218-2|CAB05687.1|  705|Caenorhabditis elegans Hypothetical pr...    29   4.9  
AC006675-10|AAK84551.2|  280|Caenorhabditis elegans Serpentine r...    29   4.9  
Z93381-6|CAB07609.1|  724|Caenorhabditis elegans Hypothetical pr...    28   6.4  
Z83218-8|CAB05693.1|  724|Caenorhabditis elegans Hypothetical pr...    28   6.4  

>Z92782-12|CAH60765.1|  328|Caenorhabditis elegans Hypothetical
           protein F14F8.13 protein.
          Length = 328

 Score = 35.1 bits (77), Expect = 0.056
 Identities = 13/41 (31%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
 Frame = -1

Query: 133 YVYNRDRMASPELYLT--YCRTIQFSHYFFFIILVLIYSVV 17
           YV+N +R    +L +   +CR ++FS++ F I++VL++ ++
Sbjct: 38  YVHNLNRHREKDLLIVQLFCRMVKFSYFIFIIVVVLLFLIM 78


>Z83316-9|CAN99655.1|  250|Caenorhabditis elegans Hypothetical
           protein B0379.4c protein.
          Length = 250

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 13/58 (22%), Positives = 26/58 (44%)
 Frame = -2

Query: 327 TPDLLNVVRESLLHVSQGLIVRIPAVSVLYSRSKSRRLA*FDMKLLMMEENVRPTSKP 154
           TP  L ++   LLH  +G I   P +  L  +  +++    D+   ++  + +P   P
Sbjct: 35  TPSALEIIELGLLHCKKGTINEKPLLPPLLPQDSNKKCLVIDLDETLVHSSFKPVKNP 92


>Z71177-9|CAA94868.2|  425|Caenorhabditis elegans Hypothetical
           protein AC3.4 protein.
          Length = 425

 Score = 30.3 bits (65), Expect = 1.6
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -2

Query: 669 AC*WKTPFRFHCSPWCTRACDQRSIKTRTVPLLPRAPCLRE-LE*CAPT 526
           +C  +TP    C P C + C Q+ ++T+ +    +  C ++ ++ CAPT
Sbjct: 140 SCVVQTPAAVQCVPQCQQQCQQQCVQTQPIQQC-QPQCQQQCVQQCAPT 187


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 14/49 (28%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
 Frame = -2

Query: 669 AC*WKTPFRFHCSPWCTRACDQRSIKTRTVPLLPRAPCLRE-LE*CAPT 526
           +C  +TP    C P C + C Q+ ++T+ +    +  C ++ ++ CAPT
Sbjct: 140 SCVVQTPAPVQCVPQCQQQCQQQCVQTQPIQQC-QPQCQQQCVQQCAPT 187


>AF036702-10|AAU05573.1|  164|Caenorhabditis elegans Hypothetical
           protein F33D4.8 protein.
          Length = 164

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 16/45 (35%), Positives = 23/45 (51%)
 Frame = +2

Query: 203 SNYANLRDFEREYKTDTAGMRTIRPWLTWRSDSLTTLRRSGVLLM 337
           SN   L  +E   K    G+R  + WLTW S +L   R+S  L++
Sbjct: 34  SNRTQLLTYEMAQKPHHIGVR--KSWLTWHSQNLEEFRQSQPLVV 76


>Z81533-14|CAB04331.2|  707|Caenorhabditis elegans Hypothetical
           protein F36G9.12 protein.
          Length = 707

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = -2

Query: 510 LGFGKCILCVSKYSMLWVLEG 448
           +GF KC+ C+   SMLWV+ G
Sbjct: 267 VGFIKCLDCIRFLSMLWVVSG 287


>U40419-6|AAL02445.2|  408|Caenorhabditis elegans Hypothetical
           protein C27F2.7 protein.
          Length = 408

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 1/42 (2%)
 Frame = -1

Query: 769 TEVRSASG-KLLADRSFLVINVRGVFPGFSRSGLSVLMENTI 647
           TEVR     +   DR F+  N+RGV   FSR+   +  E T+
Sbjct: 189 TEVRLLKRERTRTDRQFISNNIRGVLAPFSRALTKITFETTV 230


>AC024877-2|AAF60905.2|  608|Caenorhabditis elegans Hypothetical
           protein Y95B8A.7 protein.
          Length = 608

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = +3

Query: 543 PTPEDREHGAVEERFSSLCYAGHMPGYTMGYNENGMVFSIN 665
           P PE RE   V++R  +  YAG  PG     N + ++  IN
Sbjct: 248 PAPEGREFNIVDDRTINEKYAGLNPGVEFISNVDRLISDIN 288


>AC024787-1|AAF60607.2|  469|Caenorhabditis elegans Hypothetical
           protein Y46C8AR.1 protein.
          Length = 469

 Score = 29.5 bits (63), Expect = 2.8
 Identities = 21/83 (25%), Positives = 37/83 (44%)
 Frame = +3

Query: 519 YIMSAHIIPTPEDREHGAVEERFSSLCYAGHMPGYTMGYNENGMVFSINTLSPLLLKPGN 698
           Y +S   +  PED ++ +    FSS   + H+P YT+G+ E       N    +     N
Sbjct: 212 YAVSRFDLRQPEDIQYFSDYSLFSSYV-SSHLPDYTLGFEE--ATTGSNVFEVINKFYDN 268

Query: 699 TPRTFITRKLLSAKSFPDAERTS 767
           T  T  +  ++ +K +P+    S
Sbjct: 269 TQATCGSNLIILSKRYPNTADVS 291


>Z93381-5|CAB07608.2|  720|Caenorhabditis elegans Hypothetical
           protein F28G4.5 protein.
          Length = 720

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 507 GFGKCILCVSKYSMLWVLEG 448
           GF KC+ C+   SMLWV+ G
Sbjct: 250 GFIKCLDCIRFVSMLWVVAG 269


>Z83218-4|CAB05690.2|  706|Caenorhabditis elegans Hypothetical
           protein C31A11.7 protein.
          Length = 706

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 507 GFGKCILCVSKYSMLWVLEG 448
           GF KC+ C+   SMLWV+ G
Sbjct: 265 GFIKCLDCIRFLSMLWVVTG 284


>Z83218-2|CAB05687.1|  705|Caenorhabditis elegans Hypothetical
           protein C31A11.5 protein.
          Length = 705

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = -2

Query: 507 GFGKCILCVSKYSMLWVLEG 448
           GF KC+ C+   SMLWV+ G
Sbjct: 258 GFIKCLDCIRFLSMLWVVTG 277


>AC006675-10|AAK84551.2|  280|Caenorhabditis elegans Serpentine
           receptor, class bc (class b-like) protein 57 protein.
          Length = 280

 Score = 28.7 bits (61), Expect = 4.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 103 PELYLTYCRTIQFSHYFFFIILVLIYSVV 17
           P+L L YCR +    + F ++L  +YS+V
Sbjct: 40  PDLKLIYCRFVAEIFFHFVVVLNKLYSIV 68


>Z93381-6|CAB07609.1|  724|Caenorhabditis elegans Hypothetical
           protein C31A11.1 protein.
          Length = 724

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 507 GFGKCILCVSKYSMLWVLEG 448
           GF KC+ C+   SMLW++ G
Sbjct: 258 GFIKCLDCIRFLSMLWIVTG 277


>Z83218-8|CAB05693.1|  724|Caenorhabditis elegans Hypothetical
           protein C31A11.1 protein.
          Length = 724

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -2

Query: 507 GFGKCILCVSKYSMLWVLEG 448
           GF KC+ C+   SMLW++ G
Sbjct: 258 GFIKCLDCIRFLSMLWIVTG 277


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,655,492
Number of Sequences: 27780
Number of extensions: 453773
Number of successful extensions: 1237
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1235
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1861650246
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)