Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0410
(656 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.) 99 4e-21
SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 8e-13
SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014) 50 2e-06
SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0) 45 6e-05
SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45) 40 0.002
SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22) 39 0.003
SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23) 39 0.003
SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0) 39 0.004
SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44) 37 0.017
SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0) 36 0.022
SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.038
SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13) 34 0.089
SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.12
SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42) 33 0.27
SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0) 32 0.36
SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.47
SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14) 31 0.62
SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28) 31 0.62
SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.83
SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0) 30 1.4
SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0) 30 1.4
SB_30412| Best HMM Match : E-MAP-115 (HMM E-Value=2.8) 30 1.9
SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039) 30 1.9
SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 2.5
SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012) 29 3.3
SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0) 29 3.3
SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0) 29 3.3
SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40) 29 3.3
SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35) 29 3.3
SB_53793| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.4
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 28 5.8
SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 28 5.8
SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_35108| Best HMM Match : AT_hook (HMM E-Value=0.15) 28 7.7
SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34) 28 7.7
SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 7.7
SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.7
>SB_15870| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 98.7 bits (235), Expect = 4e-21
Identities = 49/82 (59%), Positives = 58/82 (70%), Gaps = 1/82 (1%)
Frame = +2
Query: 257 AAVSKTAVATIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 433
A +SKTA A IERVKLL+Q Q + K D YKG++D R + +G LSFWRGN AN
Sbjct: 20 AIISKTAAAPIERVKLLVQNQDEMLKAGRLDHPYKGVIDCTSRTYRSEGFLSFWRGNLAN 79
Query: 434 VIRYFPTQALNFAFKDKYKQVF 499
IRYFPTQALNFAFKD+ K +F
Sbjct: 80 CIRYFPTQALNFAFKDQVKALF 101
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/51 (31%), Positives = 32/51 (62%)
Frame = +2
Query: 350 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 502
+YKG +D ++I K++G +S +G AN++R + F DK+K++++
Sbjct: 248 KYKGSIDCTIQILKKEGAMSLMKGAGANILRGMAGAGVLAGF-DKFKELYV 297
Score = 31.9 bits (69), Expect = 0.47
Identities = 17/27 (62%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +1
Query: 580 SLCFVYPLDFARTRLAAD--VGKGDGQ 654
SL FVY LD+ RTRLA D VGK G+
Sbjct: 127 SLFFVYSLDYCRTRLANDAKVGKKGGE 153
>SB_54666| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 70.9 bits (166), Expect = 8e-13
Identities = 33/78 (42%), Positives = 55/78 (70%)
Frame = +2
Query: 260 AVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 439
AVS+T+V+ +ERVK+LLQ+Q + ++KG++ ++I KE+G+L +++GN NVI
Sbjct: 46 AVSRTSVSPLERVKILLQIQ------VKNPKFKGVLPTLIQIGKEEGILGYFKGNGTNVI 99
Query: 440 RYFPTQALNFAFKDKYKQ 493
R FP A+ FA ++YK+
Sbjct: 100 RIFPYSAVQFAAYEEYKK 117
>SB_28512| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 453
Score = 58.4 bits (135), Expect = 5e-09
Identities = 38/98 (38%), Positives = 57/98 (58%)
Frame = +2
Query: 257 AAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANV 436
A VS+TA A ++R+K+LLQVQ A+ GIV F + +E G+ S WRGN ANV
Sbjct: 147 AGVSRTATAPLDRLKVLLQVQ------ASSTNRFGIVSGFKMMLREGGIKSLWRGNGANV 200
Query: 437 IRYFPTQALNFAFKDKYKQVFLGGLTRRRSSGVTSLVI 550
I+ P + F +K K++ +G T ++ GVT ++
Sbjct: 201 IKIAPESGIKFFAYEKAKKL-VGSDT--KALGVTDRLL 235
Score = 33.5 bits (73), Expect = 0.15
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +2
Query: 308 LQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKY 487
L+V I +Y+G++ A I +++G+ SF+RG F +++ P ++ A +
Sbjct: 251 LEVLKTRLAIRKTGQYRGLLHAASVIYQKEGIRSFYRGLFPSLLGIIPYAGIDLAVYETL 310
Query: 488 KQVFL 502
K +L
Sbjct: 311 KNFYL 315
>SB_53794| Best HMM Match : Mito_carr (HMM E-Value=0.00014)
Length = 76
Score = 50.0 bits (114), Expect = 2e-06
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 257 AAVSKTAVATIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWR 418
A +SKTA A IERVKLL+Q Q + K YKG+VD +R + +G+ SFWR
Sbjct: 21 AIISKTAAAPIERVKLLVQNQDEMLKAGRLSSPYKGVVDCTMRTYRAEGIGSFWR 75
>SB_18218| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 375
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/55 (32%), Positives = 31/55 (56%)
Frame = +2
Query: 308 LQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFA 472
L+V V Q+ + G++ F + K +G+ +FW+GN + IR FP A+ +A
Sbjct: 79 LEVVKVLAQVGTQEAKPGLIRTFASVYKREGIKAFWKGNGVSCIRLFPYSAVQYA 133
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/63 (33%), Positives = 34/63 (53%)
Frame = +2
Query: 263 VSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIR 442
++ V E +K L VQHV+K A YKG+ A I +E+G+L+ ++G + +
Sbjct: 165 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKGVTPSFLG 221
Query: 443 YFP 451
FP
Sbjct: 222 LFP 224
>SB_1246| Best HMM Match : Mito_carr (HMM E-Value=1.4013e-45)
Length = 773
Score = 39.9 bits (89), Expect = 0.002
Identities = 14/48 (29%), Positives = 30/48 (62%)
Frame = +2
Query: 350 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQ 493
+Y G+ +I +++GL +++GN N++R P A+ FA +++K+
Sbjct: 590 KYSGVGGTLAKIYRDEGLYGYFKGNGTNIVRIVPYTAVQFAAYEEFKK 637
>SB_49149| Best HMM Match : Mito_carr (HMM E-Value=4.7e-22)
Length = 95
Score = 39.1 bits (87), Expect = 0.003
Identities = 16/55 (29%), Positives = 32/55 (58%)
Frame = +2
Query: 335 IAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 499
I ++Y G+++AF RI +++G+ +F+RG +I P ++F + K+ F
Sbjct: 19 ITQKKKYTGLINAFTRIYRDEGMRTFYRGYVPTLIGIMPYAGISFFTYETCKKAF 73
>SB_50582| Best HMM Match : Mito_carr (HMM E-Value=2.1e-23)
Length = 1026
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/80 (26%), Positives = 39/80 (48%)
Frame = +2
Query: 260 AVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVI 439
A TAV I+ VK +Q Q + A++ YK +D F ++ + +G + +RG ++
Sbjct: 925 ATGATAVYPIDLVKTRMQNQRAV--LEAEKVYKNSIDCFFKVVRNEGPIGLYRGLLPQLL 982
Query: 440 RYFPTQALNFAFKDKYKQVF 499
P +A+ D + +F
Sbjct: 983 GVSPEKAIKLTTNDFVRGIF 1002
>SB_11756| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 274
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/64 (31%), Positives = 37/64 (57%)
Frame = +2
Query: 278 VATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQ 457
+A ++ VK+ LQ+Q +K+ + Y+G VD V++ + +GL ++GN +R P
Sbjct: 51 IAPVDLVKIKLQMQTEAKR-STRSVYRGPVDCLVKLYRSRGLAGCFQGNTVTAVRDIPGF 109
Query: 458 ALNF 469
A+ F
Sbjct: 110 AVYF 113
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +2
Query: 350 RYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNF 469
RYKG++D ++ KE+G++ F RG + ++R F Q L F
Sbjct: 170 RYKGMMDCALQSYKEEGMIVFTRGIWPTLLRGF-LQVLRF 208
>SB_46794| Best HMM Match : Mito_carr (HMM E-Value=1.12104e-44)
Length = 192
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 353 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 502
Y + +A R+ KE+G+L+ WRG +R A A + KQ+ L
Sbjct: 35 YTNVFNALYRMSKEEGVLTLWRGYIPTAVRAMVVNAAQLATYSQAKQLLL 84
Score = 34.7 bits (76), Expect = 0.067
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Frame = +2
Query: 353 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV---FLGG 508
YKG +D RI + +G+ + W+G R P L F F ++ + F GG
Sbjct: 133 YKGTMDVLARIVRNEGVFALWKGFTPYYFRIGPHTVLTFIFLEQLNRAANYFYGG 187
>SB_36589| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 264
Score = 36.3 bits (80), Expect = 0.022
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +2
Query: 362 IVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 496
++ AF I + +GLL++++GN A ++R FP A+ F + Y +V
Sbjct: 13 VLTAFRAIYRNEGLLAYFKGNGAMMLRTFPYGAVQFLSYEHYSKV 57
>SB_23056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 266
Score = 35.5 bits (78), Expect = 0.038
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 365 VDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYK 490
+DA ++IP+ +GL S WRG ++ P + F D+ K
Sbjct: 64 IDALIKIPRYEGLSSLWRGLPPTMVMAVPNTVIYFTLYDQLK 105
>SB_4905| Best HMM Match : Mito_carr (HMM E-Value=3.3e-13)
Length = 577
Score = 34.3 bits (75), Expect = 0.089
Identities = 19/53 (35%), Positives = 30/53 (56%)
Frame = +2
Query: 263 VSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 421
++ V E +K L VQHV+K A YKG+ A I +E+G+L+ ++G
Sbjct: 434 IAMVTVYPCEVIKTRLTVQHVNKSNA---HYKGMRHALKTILREEGILALYKG 483
>SB_45843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 796
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +2
Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 496
+P+E L W G F++VI F A+N AF+++YK++
Sbjct: 272 LPREVYLFYSWIGAFSSVINPFIYGAMNPAFREEYKKI 309
>SB_34206| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 213
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +2
Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGLTRRRSSG 532
+P+E +L W G ++VI F A+N F+D+YK++ L R R SG
Sbjct: 139 LPREVYVLYTWLGTLSSVINPFIYGAMNPVFRDEYKKL----LRRMRRSG 184
>SB_42958| Best HMM Match : Mito_carr (HMM E-Value=4.60046e-42)
Length = 247
Score = 32.7 bits (71), Expect = 0.27
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 281 ATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 421
A ERVK LLQVQ K+ RY+G+ D +++ + GL ++G
Sbjct: 179 APTERVKCLLQVQ---KESGTKARYQGLGDCLLQVYRTGGLRGVFKG 222
>SB_8951| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 434
Score = 32.3 bits (70), Expect = 0.36
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 5/76 (6%)
Frame = +2
Query: 239 PGWRYPAAVSKTAVAT-----IERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGL 403
P WR+ + + VAT ++ V+ L VQ +S + ++ Y GIV A RI E+G+
Sbjct: 28 PLWRFVSGATAGVVATASTHPLDVVRARLTVQDMSTRSISN--YTGIVSALRRIHIEEGI 85
Query: 404 LSFWRGNFANVIRYFP 451
++G +++ P
Sbjct: 86 RGLYKGLVPSLVSIAP 101
>SB_31912| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 31.9 bits (69), Expect = 0.47
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Frame = +2
Query: 263 VSKTAVATIERVKLLLQVQ---HVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 421
+SK + + +K +QVQ + Q+Y G+ D F I KE+G + ++G
Sbjct: 42 ISKAVILPFDIIKKRIQVQGFEEARQSFGRVQQYDGVKDCFRTILKEEGAMGLFKG 97
>SB_17535| Best HMM Match : C2 (HMM E-Value=2.7e-14)
Length = 553
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +2
Query: 266 SKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGN 424
S+ VA ER +L+ Q Q +D RY+G +D+F + +G L +RG+
Sbjct: 278 SRQTVACPERCGVLMASQGKRGQYMSDARYRGHLDSFRGDARYRGHLDSFRGD 330
>SB_3432| Best HMM Match : 7tm_1 (HMM E-Value=3.8e-28)
Length = 343
Score = 31.5 bits (68), Expect = 0.62
Identities = 18/51 (35%), Positives = 29/51 (56%)
Frame = +2
Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGLTRRRSSGV 535
+P+E L + G ++VI F A+N F+++YK+VF R R+S V
Sbjct: 263 LPRELYFLYTYVGVLSSVINPFIYGAMNPMFREEYKKVFRIATFRGRNSAV 313
>SB_19664| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 31.1 bits (67), Expect = 0.83
Identities = 23/61 (37%), Positives = 30/61 (49%)
Frame = +1
Query: 190 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSNHRACQAAAPSTARQQADRRRPALQGYRR 369
RT+ R + R R + V+ RR DRR + A T+R+Q DRRR Q RR
Sbjct: 85 RTRARVTSRRQVDRRRTRARVTIRRQVDRR------RTRARVTSRRQVDRRRTRAQVTRR 138
Query: 370 R 372
R
Sbjct: 139 R 139
Score = 31.1 bits (67), Expect = 0.83
Identities = 23/61 (37%), Positives = 29/61 (47%)
Frame = +1
Query: 190 RTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSNHRACQAAAPSTARQQADRRRPALQGYRR 369
RT+ R + R R + V+RRR DRR + A T R+Q DRRR Q R
Sbjct: 115 RTRARVTSRRQVDRRRTRAQVTRRRQVDRR------RTRARVTRRRQVDRRRTRAQVTSR 168
Query: 370 R 372
R
Sbjct: 169 R 169
>SB_51010| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 306
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 257 AAVSKTAVAT-IERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRG 421
+ V +A+AT + VK+ Q + + I YK + AF +I K++G L W G
Sbjct: 124 SGVIGSAIATPTDLVKIRFQAVKIGETIP----YKNMFHAFYKIAKKEGFLGLWTG 175
>SB_17703| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 611
Score = 30.3 bits (65), Expect = 1.4
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 287 IERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQA 460
++ VK Q + +Y G D +I G+ +F +G A ++R FPT A
Sbjct: 378 VDMVKSCYQADGRTNSGKPQYKYNGYADCVKKIYISGGVSAFGQGLLATILRGFPTNA 435
Score = 27.9 bits (59), Expect = 7.7
Identities = 18/72 (25%), Positives = 30/72 (41%)
Frame = +2
Query: 254 PAAVSKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFAN 433
P ++KT V + + L+ V ++ Y G +D ++ +GL +RG
Sbjct: 264 PMELAKTRVQVQGQGQKLVHVFFLTNTETKQMAYTGSLDCLKKVFHSEGLRGCFRGMAIT 323
Query: 434 VIRYFPTQALNF 469
R P AL F
Sbjct: 324 TTRDIPAFALYF 335
>SB_30412| Best HMM Match : E-MAP-115 (HMM E-Value=2.8)
Length = 492
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/79 (26%), Positives = 35/79 (44%)
Frame = +1
Query: 256 RRRLQDRRSNHRACQAAAPSTARQQADRRRPALQGYRRRLRAHPQGAGSPFILAW*LRQR 435
++ LQ + HR + A+Q+ R+ LQG R R + +G+ W R+R
Sbjct: 267 QKELQGKGGRHRGNGEGSVVNAQQEWKERQKELQGKGGRHRGNGEGSALNVQQEW--RER 324
Query: 436 HQVLPDPGAQLRLQGQVQA 492
+ L G + R G+ A
Sbjct: 325 QKELQGKGGRHRGNGEGSA 343
Score = 29.5 bits (63), Expect = 2.5
Identities = 21/79 (26%), Positives = 36/79 (45%)
Frame = +1
Query: 256 RRRLQDRRSNHRACQAAAPSTARQQADRRRPALQGYRRRLRAHPQGAGSPFILAW*LRQR 435
++ LQ + HR + A+Q+ R+ LQG R R + +G+ W R+R
Sbjct: 354 QKELQGKGGRHRGNGEGSVVNAQQEWRERQKELQGKGGRHRGNGEGSAVNAQQEW--RER 411
Query: 436 HQVLPDPGAQLRLQGQVQA 492
+ L G + R +G+ A
Sbjct: 412 QKELQGKGGRHRGKGEGSA 430
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/76 (26%), Positives = 33/76 (43%)
Frame = +1
Query: 256 RRRLQDRRSNHRACQAAAPSTARQQADRRRPALQGYRRRLRAHPQGAGSPFILAW*LRQR 435
++ LQ + HR + A+Q+ R+ LQG R R +G+ W R+R
Sbjct: 383 QKELQGKGGRHRGNGEGSAVNAQQEWRERQKELQGKGGRHRGKGEGSAVNVQQEW--RER 440
Query: 436 HQVLPDPGAQLRLQGQ 483
+ L G + R G+
Sbjct: 441 QKELQGKGGRHRGNGE 456
Score = 27.9 bits (59), Expect = 7.7
Identities = 19/76 (25%), Positives = 34/76 (44%)
Frame = +1
Query: 256 RRRLQDRRSNHRACQAAAPSTARQQADRRRPALQGYRRRLRAHPQGAGSPFILAW*LRQR 435
++ LQ + HR + A+Q+ R+ LQG R R + +G+ W ++R
Sbjct: 209 QKELQGKGGRHRGNGEGSVVNAQQEWKERQKELQGKGGRHRGNGEGSAVNAQQEW--KER 266
Query: 436 HQVLPDPGAQLRLQGQ 483
+ L G + R G+
Sbjct: 267 QKELQGKGGRHRGNGE 282
>SB_23920| Best HMM Match : Mito_carr (HMM E-Value=0.00039)
Length = 54
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +2
Query: 359 GIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQV 496
G+V + G +RGN A ++R P ++ F ++YK++
Sbjct: 1 GVVHVLTQTYTTNGFTGLFRGNSATMMRVVPYASIQFTSHEQYKKL 46
>SB_39097| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 226
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 405
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 83 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 117
>SB_37560| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 706
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 405
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 217
>SB_27874| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 29.5 bits (63), Expect = 2.5
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = -2
Query: 634 HRRRDGYVRSRGGTRSTERWLRRHHRRPDYQRSNARTAS-SC 512
+ RD RS+ +R++ RWL R R+P S+ R++S SC
Sbjct: 6 NNNRDN-TRSQVRSRNSNRWLLRQQRQPQRHLSHKRSSSNSC 46
>SB_12356| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 404
Score = 29.5 bits (63), Expect = 2.5
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 405
A+ S RQQ R RP +GY +R R +P+ SP
Sbjct: 261 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARASP 295
>SB_31675| Best HMM Match : zf-CCHC (HMM E-Value=0.012)
Length = 550
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/35 (42%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 405
A+ S RQQ R RP GY +R R +P+ SP
Sbjct: 84 ASGSNQRQQQARGRPQASGYNQRSRRGYPRARASP 118
>SB_27773| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 203
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/54 (25%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 353 YKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF--LGG 508
Y+G++ + KE+G+ +F+R + P Q L+F + ++ LGG
Sbjct: 32 YRGVIHCATSVFKEEGIRAFYRSYTTQLSMNIPFQTLHFTVYEYARKALNPLGG 85
>SB_54004| Best HMM Match : Mito_carr (HMM E-Value=0)
Length = 309
Score = 29.1 bits (62), Expect = 3.3
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +2
Query: 287 IERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRYFPTQALN 466
++ +K+ LQ + K +KG +D F++ + +GL ++G + ++ P+ AL
Sbjct: 41 LDLLKVRLQAMNQVKP-GETAPFKGAMDCFMKTVRLEGLRGLYKGMLSPLLMATPSTALT 99
Query: 467 F 469
F
Sbjct: 100 F 100
>SB_45532| Best HMM Match : 7tm_1 (HMM E-Value=2.6e-40)
Length = 368
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/50 (32%), Positives = 27/50 (54%)
Frame = +2
Query: 383 IPKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGLTRRRSSG 532
+P+E +L + G ++VI F A+N FK++YK++ T R G
Sbjct: 267 LPREVYVLYSFLGGLSSVINPFIYGAMNPIFKEQYKKILRPRCTGRIVEG 316
>SB_189| Best HMM Match : Peptidase_A17 (HMM E-Value=1.9e-35)
Length = 965
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 253 IPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 125
+PP R +A + + FD+ + I TR RGG ++ WG+
Sbjct: 540 LPPDRTEVAPSFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 581
>SB_53793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 833
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/28 (53%), Positives = 17/28 (60%)
Frame = -3
Query: 552 QITSEVTPELRLLVKPPRNTCLYLSLKA 469
Q+T V E RLL KP R+ C YLS A
Sbjct: 133 QVTGIVDAEARLL-KPGRSECFYLSFSA 159
>SB_11434| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 866
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +2
Query: 386 PKEQGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFL 502
P+E L W G ++VI F +N F++++K+++L
Sbjct: 815 PRELYLFYSWLGALSSVINPFIYGVMNPMFREEFKRIYL 853
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/68 (29%), Positives = 33/68 (48%)
Frame = +1
Query: 178 RSHNRTKCRTSPIRSRSLRTSWLAVSRRRLQDRRSNHRACQAAAPSTARQQADRRRPALQ 357
+ ++R++ R+S R RS S R R + R HR + +PS R R +
Sbjct: 318 KKYSRSRSRSSERRRRSRSRSTEHRYRSRSRSPRRKHRRSTSTSPSR------RYRSGKK 371
Query: 358 GYRRRLRA 381
G++RR R+
Sbjct: 372 GHKRRSRS 379
>SB_26637| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 406
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +1
Query: 304 AAPSTARQQADRRRPALQGYRRR-LRAHPQGAGSP 405
A+ S RQQ R RP +GY +R R +P+ +P
Sbjct: 183 ASGSNQRQQQARGRPQARGYNQRSRRGYPRARATP 217
>SB_5019| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1616
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -2
Query: 253 IPPARKSLANATGSARFDILFDYVIFTR*ICRGGSCGTRGWGI 125
+PP R +A + FD+ + I TR RGG ++ WG+
Sbjct: 1267 LPPDRTEVAPPFTNVGFDVFGPWTIHTR-KTRGGVLNSKRWGL 1308
>SB_35108| Best HMM Match : AT_hook (HMM E-Value=0.15)
Length = 1600
Score = 27.9 bits (59), Expect = 7.7
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = +3
Query: 603 RLRTYPSRRRCR*GRWP 653
R+ T PSRR CR RWP
Sbjct: 1562 RVTTPPSRRGCRHSRWP 1578
>SB_52834| Best HMM Match : Mito_carr (HMM E-Value=6.7e-34)
Length = 302
Score = 27.9 bits (59), Expect = 7.7
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +2
Query: 266 SKTAVATIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKEQGLLSFWRGNFANVIRY 445
+ AV ++ +K LQ+ + + + Y GI+D +I +GL +F++G +I
Sbjct: 219 ASVAVNPLDVIKTRLQLLNRPQ---GEPNYNGIIDCAKKIYSNEGLAAFYKGAVPRMIVI 275
Query: 446 FP 451
P
Sbjct: 276 AP 277
>SB_28925| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 792
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/52 (26%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = +2
Query: 32 ISKKAHTYPLCSRDYEITPNLLFKNQELV----FRDPPSACAATPTSTYSPS 175
++ ++ Y C + E +P + + ++D SAC A P TY PS
Sbjct: 106 LTDESELYGYCQSNGEWSPAMYTSRHRCMCHAGYQDTVSACTACPRGTYKPS 157
>SB_5442| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = +2
Query: 290 ERVKLLLQVQHVSKQIAADQRYK-GIVDAFVRIPKEQGLLSFWRGNFANVIRYFP 451
E +K LQ QH + I+ K G++D ++I + G +RG A R P
Sbjct: 128 ELIKCRLQAQHQTNLISGMAGPKSGVIDVTMQIIRNDGFQGLFRGMTATWAREVP 182
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,228,355
Number of Sequences: 59808
Number of extensions: 420457
Number of successful extensions: 1405
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1395
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1681430875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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