Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0409
         (750 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   1.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.0  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   4.6  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.0  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 323 MIFTNN*KSFCNPILQLDKKCV 388
           +I TNN   +C  ++ L K CV
Sbjct: 238 IILTNNQAKYCTTLIGLIKNCV 259


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +1

Query: 601 LRYLSMNNYLSCLHHLNVISCIF 669
           LR    NNY S  H+L V   +F
Sbjct: 511 LRVQRFNNYQSLAHYLRVFFTVF 533


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +1

Query: 247 NRRYELLE-STLDELNSALDFLERKNDDIHQQLKELLQ 357
           NR+  +L+    +EL   +DF  R     H++L E+L+
Sbjct: 83  NRKNRVLQWREPEELRRLMDFGVRSAPSTHEELLEVLK 120


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 663 HIYVNRNEQ*HLVEHCSQKKNGS 731
           H+ V+  E+ +  EHCS K + S
Sbjct: 209 HLRVHTGERPYGCEHCSMKFSDS 231


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,463
Number of Sequences: 336
Number of extensions: 3323
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20027417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)