Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0409
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    24   5.8  
AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol ...    24   5.8  
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    23   7.6  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    23   7.6  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
 Frame = +1

Query: 250 RRYELLESTLDELNSA-------LDFLERKNDDIHQQLKELLQSNIAIRQEMRE 390
           +R E L+  L+ELNSA       L  + RK     Q +K+L Q  +   Q++++
Sbjct: 716 QRREQLQRELNELNSAYAKEDERLQEMTRKLHQRQQHMKKLQQELLTNEQQLQQ 769


>AJ439353-7|CAD27929.1|  555|Anopheles gambiae putative glycerol
           kinase protein.
          Length = 555

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -3

Query: 85  STLASMTELVYQAGCSAPPVVA 20
           ST   +T + YQ G +APP+ A
Sbjct: 295 STHGLVTTVAYQMGRNAPPIYA 316


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 380 KCVKKIRKSTTVIEEMQIQ 436
           +CVK++RK+  + E+M  Q
Sbjct: 111 ECVKRLRKTRHMFEQMNAQ 129


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 380 KCVKKIRKSTTVIEEMQIQ 436
           +CVK++RK+  + E+M  Q
Sbjct: 213 ECVKRLRKTRHMFEQMNAQ 231


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 676,671
Number of Sequences: 2352
Number of extensions: 11981
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)