Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0409
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical pr... 31 0.87
X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy ch... 31 0.87
M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein. 31 0.87
AF014939-5|AAB63928.2| 302|Caenorhabditis elegans Hypothetical ... 30 2.0
AF077542-4|AAU20829.1| 315|Caenorhabditis elegans Serpentine re... 29 3.5
Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical p... 29 4.7
Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical p... 29 4.7
Z77134-2|CAB00873.1| 877|Caenorhabditis elegans Hypothetical pr... 29 4.7
AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical ... 29 4.7
AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical ... 29 4.7
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 28 8.1
AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical ... 28 8.1
AF016679-3|AAB66160.1| 578|Caenorhabditis elegans Hypothetical ... 28 8.1
AF016679-2|AAB66159.1| 658|Caenorhabditis elegans Hypothetical ... 28 8.1
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 32.3 bits (70), Expect = 0.38
Identities = 18/49 (36%), Positives = 28/49 (57%)
Frame = +1
Query: 247 NRRYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREE 393
N+ LESTLDEL L+ +R D +Q ++ ++ + I QE+ EE
Sbjct: 1031 NKTKAKLESTLDELEDTLEREKRGRQDCEKQRRK-VEGELKIAQELIEE 1078
>Z68119-8|CAA92197.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 31.1 bits (67), Expect = 0.87
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 265 LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 399
LE+ ++EL ALD + N+D + ++ L ++Q + EE K
Sbjct: 1634 LEADINELEIALDHANKANEDAQKNIRRYLDQIRELQQTVDEEQK 1678
>Z68117-6|CAA92183.2| 1947|Caenorhabditis elegans Hypothetical protein
T18D3.4 protein.
Length = 1947
Score = 31.1 bits (67), Expect = 0.87
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 265 LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 399
LE+ ++EL ALD + N+D + ++ L ++Q + EE K
Sbjct: 1634 LEADINELEIALDHANKANEDAQKNIRRYLDQIRELQQTVDEEQK 1678
>X08066-1|CAA30855.1| 1947|Caenorhabditis elegans myosin heavy chain 2
protein.
Length = 1947
Score = 31.1 bits (67), Expect = 0.87
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 265 LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 399
LE+ ++EL ALD + N+D + ++ L ++Q + EE K
Sbjct: 1634 LEADINELEIALDHANKANEDAQKNIRRYLDQIRELQQTVDEEQK 1678
>M37235-1|AAA28122.1| 273|Caenorhabditis elegans myosin II protein.
Length = 273
Score = 31.1 bits (67), Expect = 0.87
Identities = 14/45 (31%), Positives = 25/45 (55%)
Frame = +1
Query: 265 LESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 399
LE+ ++EL ALD + N+D + ++ L ++Q + EE K
Sbjct: 134 LEADINELEIALDHANKANEDAQKNIRRYLDQIRELQQTVDEEQK 178
>AF014939-5|AAB63928.2| 302|Caenorhabditis elegans Hypothetical
protein ZC132.6 protein.
Length = 302
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/46 (36%), Positives = 27/46 (58%)
Frame = +1
Query: 253 RYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMRE 390
+Y EST++ LN L + KND I Q KEL ++ + I ++R+
Sbjct: 149 KYTNSESTINSLNEKLLKEKSKNDSIQAQ-KELYENLVIIIDQLRQ 193
>AF077542-4|AAU20829.1| 315|Caenorhabditis elegans Serpentine
receptor, class z protein63 protein.
Length = 315
Score = 29.1 bits (62), Expect = 3.5
Identities = 11/41 (26%), Positives = 22/41 (53%)
Frame = -1
Query: 432 ICISSITVVDFLIFFTHFLSNCNIGLQKLFQLLVNIIIFTL 310
+ I +T+V FL++F C++ +Q F + ++ TL
Sbjct: 110 VLIMMMTLVKFLVYFFPSTEKCSLSVQSFFHKNLKLVYLTL 150
>Z80216-11|CAN99667.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +1
Query: 253 RYELLESTLDELNSALDFLE-----RKNDDIHQQLKELLQSNIAIRQEMREENKEVN 408
R LE +D L + LD + RK D I+Q++KEL + + E+ KEV+
Sbjct: 537 RLRSLEQQVDNLRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVD 593
>Z80216-10|CAB02286.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +1
Query: 253 RYELLESTLDELNSALDFLE-----RKNDDIHQQLKELLQSNIAIRQEMREENKEVN 408
R LE +D L + LD + RK D I+Q++KEL + + E+ KEV+
Sbjct: 537 RLRSLEQQVDNLRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVD 593
>Z77134-2|CAB00873.1| 877|Caenorhabditis elegans Hypothetical
protein R09H10.4 protein.
Length = 877
Score = 28.7 bits (61), Expect = 4.7
Identities = 15/62 (24%), Positives = 28/62 (45%)
Frame = +2
Query: 362 ILQLDKKCVKKIRKSTTVIEEMQIQHYFKFNCANIHVT*CNLFVSKV*NEIVNLNITIYQ 541
+LQ+ +K E I YF F + HVT + ++ +E+V +TI+
Sbjct: 201 MLQIRANIPNDWKKEDAAEYERMISQYFHFKYDSTHVTPLAMSLTYTGDEVVRTGLTIFP 260
Query: 542 YL 547
++
Sbjct: 261 FI 262
>AL023823-2|CAN99714.1| 984|Caenorhabditis elegans Hypothetical
protein F10G8.8b protein.
Length = 984
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +1
Query: 253 RYELLESTLDELNSALDFLE-----RKNDDIHQQLKELLQSNIAIRQEMREENKEVN 408
R LE +D L + LD + RK D I+Q++KEL + + E+ KEV+
Sbjct: 537 RLRSLEQQVDNLRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVD 593
>AL023823-1|CAA19441.4| 949|Caenorhabditis elegans Hypothetical
protein F10G8.8a protein.
Length = 949
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 5/57 (8%)
Frame = +1
Query: 253 RYELLESTLDELNSALDFLE-----RKNDDIHQQLKELLQSNIAIRQEMREENKEVN 408
R LE +D L + LD + RK D I+Q++KEL + + E+ KEV+
Sbjct: 537 RLRSLEQQVDNLRTQLDAAKDDSARRKRDAINQEIKELRITLKSSEDELHRYRKEVD 593
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Frame = +1
Query: 265 LESTLDELNSALDFLERKNDD---IHQQLKELLQSNIAIRQEMREE 393
+E D+LN A D L++ +DD + ++ K+LL S QE+R E
Sbjct: 125 IEVFTDQLNLARDKLQQADDDFVTLGKKYKKLLGSTRKSAQELRSE 170
>AF067618-6|AAC19197.2| 1015|Caenorhabditis elegans Hypothetical
protein F56H1.5 protein.
Length = 1015
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/34 (41%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +3
Query: 651 CYKLHIYVNRNEQ*HLVEHCSQKK-NGSIKHNIT 749
CY ++Y+N NE+ VE +KK SI+ N+T
Sbjct: 680 CYFRNLYINENEEKKNVEEQKKKKYYYSIRFNVT 713
>AF016679-3|AAB66160.1| 578|Caenorhabditis elegans Hypothetical
protein T28C12.4b protein.
Length = 578
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 262 LLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 399
LL T E+NSA+D L RKN +++ + + +R ++K
Sbjct: 347 LLRGTEKEINSAIDVLSRKNRLSRSKIEAMTEKVYGDSPALRADSK 392
>AF016679-2|AAB66159.1| 658|Caenorhabditis elegans Hypothetical
protein T28C12.4a protein.
Length = 658
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +1
Query: 262 LLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 399
LL T E+NSA+D L RKN +++ + + +R ++K
Sbjct: 427 LLRGTEKEINSAIDVLSRKNRLSRSKIEAMTEKVYGDSPALRADSK 472
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,872,971
Number of Sequences: 27780
Number of extensions: 277154
Number of successful extensions: 874
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 823
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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