Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0409
         (750 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          24   1.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      24   1.8  
AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.          24   1.8  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   2.3  
DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.              22   7.1  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    22   7.1  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 432 ICISSITVVDFLIFFTHFLSNCNIGL 355
           + I S+TV   + +F HF S  N G+
Sbjct: 448 VSIESVTVDKLITYFDHFESMLNNGV 473


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 432 ICISSITVVDFLIFFTHFLSNCNIGL 355
           + I S+TV   + +F HF S  N G+
Sbjct: 448 VSIESVTVDKLITYFDHFESMLNNGV 473


>AF134821-1|AAD40236.1|  226|Apis mellifera hexamerin protein.
          Length = 226

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 432 ICISSITVVDFLIFFTHFLSNCNIGL 355
           + I S+TV   + +F HF S  N G+
Sbjct: 74  VSIESVTVDKLITYFDHFESMLNNGV 99


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 5/54 (9%)
 Frame = +2

Query: 323 MIFTNN*KSFCNPILQLDKKCV-----KKIRKSTTVIEEMQIQHYFKFNCANIH 469
           MIFTNN  +F N +L    K V       I  S T + + +  +Y   N   I+
Sbjct: 1   MIFTNNIAAFQNVVLVKKVKIVLLIFYGSIMFSMTQVNKEECDYYQNLNLGEIY 54


>DQ435335-1|ABD92650.1|  135|Apis mellifera OBP18 protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 7/25 (28%), Positives = 14/25 (56%)
 Frame = -1

Query: 435 CICISSITVVDFLIFFTHFLSNCNI 361
           C+C+ ++T+ +F I     +  C I
Sbjct: 11  CVCVGALTLEEFQIGLRAVVPICRI 35


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +3

Query: 126 HKSSIKRLIKWHVIIQKMVVKMKMDLIKT*NLQKMITMKI 245
           HK++  + ++ H+I  K ++K+K    K   +  M+  KI
Sbjct: 424 HKAAADQKLEKHLIEYKKMLKIKRLFGKDRKIMDMVREKI 463


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,541
Number of Sequences: 438
Number of extensions: 3413
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)