Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0406
         (726 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         25   1.8  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   3.2  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            24   5.5  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    23   7.3  

>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +3

Query: 393  ENMDDNNSAQKKSDEDITTGHGDETE 470
            E+ D+++      D+D TTG G+E E
Sbjct: 1825 EDDDEDDEDDDDDDDDTTTGEGNEHE 1850


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 24.6 bits (51), Expect = 3.2
 Identities = 21/66 (31%), Positives = 30/66 (45%)
 Frame = +2

Query: 512  SSEKTESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSE 691
            S +K       VKD + QNHV   E  +    K   +D     +EV L E D++DE +  
Sbjct: 843  SEKKHHKRSKRVKDGKQQNHVSFPEFVQNGSAKQFAND---YINEV-LHE-DNEDEERQA 897

Query: 692  KGDTGD 709
             G + D
Sbjct: 898  AGPSED 903


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 23.8 bits (49), Expect = 5.5
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +2

Query: 572 VDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSEKG 697
           VD  E    NV+    S + +T     L EVD ++E   E+G
Sbjct: 18  VDRLELAANNVLP---STSNITNTTAPLDEVDGEEEEDEEEG 56


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +2

Query: 635 TKDEVGLSEVDSQDEYKSEKGDTGDDTLKG 724
           TK E G      ++  K +KG+ G+D L+G
Sbjct: 209 TKGEKGEPARHPENYNKGQKGEPGNDGLEG 238


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 640,781
Number of Sequences: 2352
Number of extensions: 12185
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74012934
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)