Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0406
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-494|AAN11520.1| 1152|Drosophila melanogaster CG1244-PF,...    32   0.91 
AE014296-493|AAN11519.1| 1152|Drosophila melanogaster CG1244-PE,...    32   0.91 
AE014296-492|AAG22231.1| 1152|Drosophila melanogaster CG1244-PD,...    32   0.91 
AE014296-491|AAF47670.1| 1152|Drosophila melanogaster CG1244-PC,...    32   0.91 
AE014296-490|AAF47669.1| 1152|Drosophila melanogaster CG1244-PB,...    32   0.91 
AE014296-489|AAG22230.1| 1152|Drosophila melanogaster CG1244-PA,...    32   0.91 
AY058771-1|AAL14000.1|  885|Drosophila melanogaster SD05329p pro...    31   1.6  
AE014296-3638|AAF51794.1|  885|Drosophila melanogaster CG7143-PA...    31   1.6  
AB049433-1|BAB15799.1|  885|Drosophila melanogaster dpol-eta pro...    31   1.6  
AB036766-1|BAB20905.1|  885|Drosophila melanogaster DNA polymera...    31   1.6  
AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-P...    30   3.7  
AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-P...    30   3.7  
BT009987-1|AAQ22456.1|  888|Drosophila melanogaster RE51676p pro...    29   4.9  
AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation ...    29   4.9  
AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA...    29   4.9  
BT023882-1|ABA81816.1| 1152|Drosophila melanogaster RE60032p pro...    29   6.4  
BT001382-1|AAN71137.1|  152|Drosophila melanogaster GH03029p pro...    29   6.4  
AE014296-823|AAF47882.2|  152|Drosophila melanogaster CG15012-PB...    29   6.4  
BT025071-1|ABE73242.1|  694|Drosophila melanogaster IP15312p pro...    29   8.5  
BT001809-1|AAN71564.1|  264|Drosophila melanogaster RH32892p pro...    29   8.5  
AY089581-1|AAL90319.1|  640|Drosophila melanogaster RE11224p pro...    29   8.5  
AE014135-48|AAS64602.1|  264|Drosophila melanogaster CG1674-PD, ...    29   8.5  
AE014135-47|AAF59357.1|  643|Drosophila melanogaster CG1674-PA, ...    29   8.5  
AE014135-46|AAN06522.1|  526|Drosophila melanogaster CG1674-PC, ...    29   8.5  
AE014135-45|AAN06521.1|  743|Drosophila melanogaster CG1674-PB, ...    29   8.5  

>AE014296-494|AAN11520.1| 1152|Drosophila melanogaster CG1244-PF,
           isoform F protein.
          Length = 1152

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 572 VDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSEKGDTGD 709
           VD  E  EEN ++N   D+++T       ++D +DE  +  GD GD
Sbjct: 101 VDGTEDVEENEVENDDEDSQITSSSSKEPKLDEEDEEATTNGD-GD 145


>AE014296-493|AAN11519.1| 1152|Drosophila melanogaster CG1244-PE,
           isoform E protein.
          Length = 1152

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 572 VDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSEKGDTGD 709
           VD  E  EEN ++N   D+++T       ++D +DE  +  GD GD
Sbjct: 101 VDGTEDVEENEVENDDEDSQITSSSSKEPKLDEEDEEATTNGD-GD 145


>AE014296-492|AAG22231.1| 1152|Drosophila melanogaster CG1244-PD,
           isoform D protein.
          Length = 1152

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 572 VDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSEKGDTGD 709
           VD  E  EEN ++N   D+++T       ++D +DE  +  GD GD
Sbjct: 101 VDGTEDVEENEVENDDEDSQITSSSSKEPKLDEEDEEATTNGD-GD 145


>AE014296-491|AAF47670.1| 1152|Drosophila melanogaster CG1244-PC,
           isoform C protein.
          Length = 1152

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 572 VDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSEKGDTGD 709
           VD  E  EEN ++N   D+++T       ++D +DE  +  GD GD
Sbjct: 101 VDGTEDVEENEVENDDEDSQITSSSSKEPKLDEEDEEATTNGD-GD 145


>AE014296-490|AAF47669.1| 1152|Drosophila melanogaster CG1244-PB,
           isoform B protein.
          Length = 1152

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 572 VDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSEKGDTGD 709
           VD  E  EEN ++N   D+++T       ++D +DE  +  GD GD
Sbjct: 101 VDGTEDVEENEVENDDEDSQITSSSSKEPKLDEEDEEATTNGD-GD 145


>AE014296-489|AAG22230.1| 1152|Drosophila melanogaster CG1244-PA,
           isoform A protein.
          Length = 1152

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 16/46 (34%), Positives = 25/46 (54%)
 Frame = +2

Query: 572 VDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSEKGDTGD 709
           VD  E  EEN ++N   D+++T       ++D +DE  +  GD GD
Sbjct: 101 VDGTEDVEENEVENDDEDSQITSSSSKEPKLDEEDEEATTNGD-GD 145


>AY058771-1|AAL14000.1|  885|Drosophila melanogaster SD05329p
           protein.
          Length = 885

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +2

Query: 554 IELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSEKGDTGDD 712
           IE  N  D  E TEE     + SDT M+K E   S+   + +  +    TG+D
Sbjct: 600 IEADNSKDFEEDTEEET--ELTSDTHMSKPEGQSSDAGQEQDPNTLNDSTGND 650


>AE014296-3638|AAF51794.1|  885|Drosophila melanogaster CG7143-PA
           protein.
          Length = 885

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +2

Query: 554 IELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSEKGDTGDD 712
           IE  N  D  E TEE     + SDT M+K E   S+   + +  +    TG+D
Sbjct: 600 IEADNSKDFEEDTEEET--ELTSDTHMSKPEGQSSDAGQEQDPNTLNDSTGND 650


>AB049433-1|BAB15799.1|  885|Drosophila melanogaster dpol-eta
           protein.
          Length = 885

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +2

Query: 554 IELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSEKGDTGDD 712
           IE  N  D  E TEE     + SDT M+K E   S+   + +  +    TG+D
Sbjct: 600 IEADNSKDFEEDTEEET--ELTSDTHMSKPEGQSSDAGQEQDPNTLNDSTGND 650


>AB036766-1|BAB20905.1|  885|Drosophila melanogaster DNA polymerase
           eta protein.
          Length = 885

 Score = 31.1 bits (67), Expect = 1.6
 Identities = 18/53 (33%), Positives = 25/53 (47%)
 Frame = +2

Query: 554 IELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSEKGDTGDD 712
           IE  N  D  E TEE     + SDT M+K E   S+   + +  +    TG+D
Sbjct: 600 IEADNSKDFEEDTEEET--ELTSDTHMSKPEGQSSDAGQEQDPNTLNDSTGND 650


>AE014134-1162|AAN10598.1| 2922|Drosophila melanogaster CG11321-PB,
            isoform B protein.
          Length = 2922

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +2

Query: 515  SEKTESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDS--QDEYKS 688
            S  +ESE S V   E     D  +     ++++ +   +  +DE+ + E +S  +DEY  
Sbjct: 2000 SHSSESETSKVVLKEFVPSGDPAKQNLSELVEDTQRLIKQMRDEISMDEFESTDEDEYSD 2059

Query: 689  EKGDTGDD 712
            E  D  D+
Sbjct: 2060 EYSDEYDE 2067


>AE014134-1161|AAF52435.2| 2594|Drosophila melanogaster CG11321-PA,
            isoform A protein.
          Length = 2594

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 2/68 (2%)
 Frame = +2

Query: 515  SEKTESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDS--QDEYKS 688
            S  +ESE S V   E     D  +     ++++ +   +  +DE+ + E +S  +DEY  
Sbjct: 1672 SHSSESETSKVVLKEFVPSGDPAKQNLSELVEDTQRLIKQMRDEISMDEFESTDEDEYSD 1731

Query: 689  EKGDTGDD 712
            E  D  D+
Sbjct: 1732 EYSDEYDE 1739


>BT009987-1|AAQ22456.1|  888|Drosophila melanogaster RE51676p
           protein.
          Length = 888

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 393 ENMDDNNSAQKKSDEDITTGHG-DETEEAKFANQSPNSLDN 512
           E   D+ S +K + ++++  +  DETE +  A Q  NSLDN
Sbjct: 490 ERFKDSQSVEKPTHQELSLRNATDETEISAMALQDVNSLDN 530


>AF030155-1|AAC38985.1| 1666|Drosophila melanogaster translation
           initiation factoreIF4G protein.
          Length = 1666

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 393 ENMDDNNSAQKKSDEDITTGHG-DETEEAKFANQSPNSLDN 512
           E   D+ S +K + ++++  +  DETE +  A Q  NSLDN
Sbjct: 490 ERFKDSQSVEKPTHQELSLRNATDETEISAMALQDVNSLDN 530


>AE014135-152|AAF59403.2| 1345|Drosophila melanogaster CG10811-PA
           protein.
          Length = 1345

 Score = 29.5 bits (63), Expect = 4.9
 Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = +3

Query: 393 ENMDDNNSAQKKSDEDITTGHG-DETEEAKFANQSPNSLDN 512
           E   D+ S +K + ++++  +  DETE +  A Q  NSLDN
Sbjct: 169 ERFKDSQSVEKPTHQELSLRNATDETEISAMALQDVNSLDN 209


>BT023882-1|ABA81816.1| 1152|Drosophila melanogaster RE60032p
           protein.
          Length = 1152

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = +2

Query: 584 ESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSEKGDTGD 709
           E  EEN ++N   D+++T       ++D +DE  +  GD GD
Sbjct: 105 EDVEENEVENDDEDSQITSSSSKEPKLDEEDEEATTNGD-GD 145


>BT001382-1|AAN71137.1|  152|Drosophila melanogaster GH03029p
           protein.
          Length = 152

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 51  WILITATNYKL*HEISAGFV*LGLFGVIN 137
           W+LI A +    H+I+ G V +G+FG I+
Sbjct: 34  WVLIDAMSIDGKHQITTGHVFIGIFGTIS 62


>AE014296-823|AAF47882.2|  152|Drosophila melanogaster CG15012-PB
           protein.
          Length = 152

 Score = 29.1 bits (62), Expect = 6.4
 Identities = 12/29 (41%), Positives = 19/29 (65%)
 Frame = +3

Query: 51  WILITATNYKL*HEISAGFV*LGLFGVIN 137
           W+LI A +    H+I+ G V +G+FG I+
Sbjct: 34  WVLIDAMSIDGKHQITTGHVFIGIFGTIS 62


>BT025071-1|ABE73242.1|  694|Drosophila melanogaster IP15312p
           protein.
          Length = 694

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 14/64 (21%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +2

Query: 509 QSSEK-TESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYK 685
           ++ EK T+ +   +K I+ QN + +    ++ + K + +  ++ ++E    E+D   +Y+
Sbjct: 81  KAQEKITQLKEQELKLIQKQNDLANEIHKQQILAKQLSAQNQLKQNECQSGELDLHSQYQ 140

Query: 686 SEKG 697
           +E+G
Sbjct: 141 NERG 144


>BT001809-1|AAN71564.1|  264|Drosophila melanogaster RH32892p
           protein.
          Length = 264

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 14/64 (21%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +2

Query: 509 QSSEK-TESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYK 685
           ++ EK T+ +   +K I+ QN + +    ++ + K + +  ++ ++E    E+D   +Y+
Sbjct: 81  KAQEKITQLKEQELKLIQKQNDLANEIHKQQILAKQLSAQNQLKQNECQSGELDLHSQYQ 140

Query: 686 SEKG 697
           +E+G
Sbjct: 141 NERG 144


>AY089581-1|AAL90319.1|  640|Drosophila melanogaster RE11224p
           protein.
          Length = 640

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 14/64 (21%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +2

Query: 509 QSSEK-TESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYK 685
           ++ EK T+ +   +K I+ QN + +    ++ + K + +  ++ ++E    E+D   +Y+
Sbjct: 195 KAQEKITQLKEQELKLIQKQNDLANEIHKQQILAKQLSAQNQLKQNECQSGELDLHSQYQ 254

Query: 686 SEKG 697
           +E+G
Sbjct: 255 NERG 258


>AE014135-48|AAS64602.1|  264|Drosophila melanogaster CG1674-PD,
           isoform D protein.
          Length = 264

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 14/64 (21%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +2

Query: 509 QSSEK-TESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYK 685
           ++ EK T+ +   +K I+ QN + +    ++ + K + +  ++ ++E    E+D   +Y+
Sbjct: 81  KAQEKITQLKEQELKLIQKQNDLANEIHKQQILAKQLSAQNQLKQNECQSGELDLHSQYQ 140

Query: 686 SEKG 697
           +E+G
Sbjct: 141 NERG 144


>AE014135-47|AAF59357.1|  643|Drosophila melanogaster CG1674-PA,
           isoform A protein.
          Length = 643

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 14/64 (21%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +2

Query: 509 QSSEK-TESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYK 685
           ++ EK T+ +   +K I+ QN + +    ++ + K + +  ++ ++E    E+D   +Y+
Sbjct: 271 KAQEKITQLKEQELKLIQKQNDLANEIHKQQILAKQLSAQNQLKQNECQSGELDLHSQYQ 330

Query: 686 SEKG 697
           +E+G
Sbjct: 331 NERG 334


>AE014135-46|AAN06522.1|  526|Drosophila melanogaster CG1674-PC,
           isoform C protein.
          Length = 526

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 14/64 (21%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +2

Query: 509 QSSEK-TESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYK 685
           ++ EK T+ +   +K I+ QN + +    ++ + K + +  ++ ++E    E+D   +Y+
Sbjct: 81  KAQEKITQLKEQELKLIQKQNDLANEIHKQQILAKQLSAQNQLKQNECQSGELDLHSQYQ 140

Query: 686 SEKG 697
           +E+G
Sbjct: 141 NERG 144


>AE014135-45|AAN06521.1|  743|Drosophila melanogaster CG1674-PB,
           isoform B protein.
          Length = 743

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 14/64 (21%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +2

Query: 509 QSSEK-TESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYK 685
           ++ EK T+ +   +K I+ QN + +    ++ + K + +  ++ ++E    E+D   +Y+
Sbjct: 298 KAQEKITQLKEQELKLIQKQNDLANEIHKQQILAKQLSAQNQLKQNECQSGELDLHSQYQ 357

Query: 686 SEKG 697
           +E+G
Sbjct: 358 NERG 361


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,835,273
Number of Sequences: 53049
Number of extensions: 500271
Number of successful extensions: 1208
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1206
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)