Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0406
         (726 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41007-19|AAA82274.1|  432|Caenorhabditis elegans Hypothetical p...    31   0.63 
U23454-6|AAC46521.1|  192|Caenorhabditis elegans Hypothetical pr...    30   1.9  
AL110490-3|CAB54449.1|  892|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z37140-5|CAA85499.1|  312|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z83122-10|CAB05601.1|  896|Caenorhabditis elegans Hypothetical p...    28   5.9  
Z83122-9|CAB05598.1|  906|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z72517-3|CAA96695.1|  717|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z37140-4|CAA85498.1|  308|Caenorhabditis elegans Hypothetical pr...    28   5.9  
AF016446-8|AAC24168.2|  345|Caenorhabditis elegans Seven tm rece...    28   5.9  
Z99281-12|CAB16521.1|  649|Caenorhabditis elegans Hypothetical p...    28   7.8  
U40957-1|ABC71816.2|   87|Caenorhabditis elegans Hypothetical pr...    28   7.8  

>U41007-19|AAA82274.1|  432|Caenorhabditis elegans Hypothetical
           protein C33H5.17 protein.
          Length = 432

 Score = 31.5 bits (68), Expect = 0.63
 Identities = 15/43 (34%), Positives = 22/43 (51%)
 Frame = +2

Query: 596 ENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSEKGDTGDDTLKG 724
           E ++  +  D E T+      E+D QDE  +E  DT  D+L G
Sbjct: 38  EELVSLMEEDEEKTQKSPDDDEIDEQDEDSAEIDDTSTDSLLG 80


>U23454-6|AAC46521.1|  192|Caenorhabditis elegans Hypothetical
           protein C10A4.7 protein.
          Length = 192

 Score = 29.9 bits (64), Expect = 1.9
 Identities = 14/41 (34%), Positives = 25/41 (60%)
 Frame = -3

Query: 709 ISCVSFLTFILILAINL*KSNFIFSHFCITPNIFNNILLST 587
           +SCVSF   ++I ++ +  S  +F+   IT  IF NI +++
Sbjct: 63  LSCVSFTIGVVITSVQILNSRILFAFLLIT--IFKNIFINS 101


>AL110490-3|CAB54449.1|  892|Caenorhabditis elegans Hypothetical
           protein Y48B6A.3 protein.
          Length = 892

 Score = 29.1 bits (62), Expect = 3.4
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = +2

Query: 581 RESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSEKGDTGDDTLK 721
           +   E+ +IK    + E  KD++ L E   +D Y   K D G D ++
Sbjct: 430 KRKAEQPLIKPEEEEDEGPKDDIRLYESGWKDRYYRAKFDVGSDDIE 476


>Z37140-5|CAA85499.1|  312|Caenorhabditis elegans Hypothetical
           protein ZK899.6 protein.
          Length = 312

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 18/70 (25%), Positives = 30/70 (42%)
 Frame = +2

Query: 509 QSSEKTESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKS 688
           Q  E+T S V +     +   +DH E   +    +V  D ++        E    DEY S
Sbjct: 216 QKDERTGSIVYSFPTKRMSRSIDHMEDATDTETSDVSEDEQV--------EESDWDEYDS 267

Query: 689 EKGDTGDDTL 718
           +K D G++ +
Sbjct: 268 DKLDDGEEDI 277


>Z83122-10|CAB05601.1|  896|Caenorhabditis elegans Hypothetical
           protein R11A5.1b protein.
          Length = 896

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = +2

Query: 512 SSEKTESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSE 691
           S E+ + +    ++ E +   D  E  EE        + E  +DE    E D +DE + E
Sbjct: 572 SDEEEDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEEDDEDEESEEESDEEDEEEEE 631

Query: 692 KGDT 703
           + D+
Sbjct: 632 EDDS 635


>Z83122-9|CAB05598.1|  906|Caenorhabditis elegans Hypothetical
           protein R11A5.1a protein.
          Length = 906

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 16/64 (25%), Positives = 28/64 (43%)
 Frame = +2

Query: 512 SSEKTESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKSE 691
           S E+ + +    ++ E +   D  E  EE        + E  +DE    E D +DE + E
Sbjct: 582 SDEEEDDDDEDEEEDEDEEEEDEDEEDEEEEENESEEEEEDDEDEESEEESDEEDEEEEE 641

Query: 692 KGDT 703
           + D+
Sbjct: 642 EDDS 645


>Z72517-3|CAA96695.1|  717|Caenorhabditis elegans Hypothetical
           protein T28F4.4 protein.
          Length = 717

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 13/53 (24%), Positives = 28/53 (52%)
 Frame = +2

Query: 524 TESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEY 682
           +E  +  + D+E +N  D ++  E+  +K  R +  + + E+ L    SQD++
Sbjct: 272 SEGILDDLSDVESENEDDDKKEEEKEDVKKKRQEKSIVEGELWLLTWLSQDDH 324


>Z37140-4|CAA85498.1|  308|Caenorhabditis elegans Hypothetical
           protein ZK899.5 protein.
          Length = 308

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 19/68 (27%), Positives = 28/68 (41%)
 Frame = +2

Query: 509 QSSEKTESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKS 688
           Q  E+T S V +     +   +DH E   +    +V  D        G  E    DEY S
Sbjct: 216 QKDERTGSIVYSFPTKRMSRSIDHMEDATDTETSDVSED--------GQVEESDWDEYDS 267

Query: 689 EKGDTGDD 712
           ++ D G+D
Sbjct: 268 DELDDGED 275


>AF016446-8|AAC24168.2|  345|Caenorhabditis elegans Seven tm
           receptor protein 205 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 14/35 (40%), Positives = 24/35 (68%)
 Frame = -3

Query: 613 IFNNILLSTFSVVNMIL*LNVFHCTNFTFGFFTRL 509
           I+ +IL   +++V++++ L +FH T FTF   TRL
Sbjct: 47  IYISILEVLYAIVDILV-LPIFHNTGFTFIILTRL 80


>Z99281-12|CAB16521.1|  649|Caenorhabditis elegans Hypothetical
           protein Y57G11C.20 protein.
          Length = 649

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/67 (20%), Positives = 29/67 (43%)
 Frame = +2

Query: 509 QSSEKTESEVSAVKDIELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEVDSQDEYKS 688
           + +E+   +V   KD + + H+D  +  E+N   N +   E  K  +   +   ++E K 
Sbjct: 164 KKAEEFAKKVQTDKDEQREKHLDTHKKAEQNAQDNQKYHDEERKKHIETQKKAEENEEKR 223

Query: 689 EKGDTGD 709
              +  D
Sbjct: 224 RAKEKAD 230


>U40957-1|ABC71816.2|   87|Caenorhabditis elegans Hypothetical
           protein R02E4.3 protein.
          Length = 87

 Score = 27.9 bits (59), Expect = 7.8
 Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +2

Query: 524 TESEVSAVKDI-ELQNHVDHRESTEENVIKNVRSDTEMTKDEVGLSEV 664
           +  +VS +K++ EL+ H D  ++ E+N+     +  E  ++EV  S V
Sbjct: 8   SSKDVSTLKELAELEKHQDAAKANEQNLKTEAETKEEQNQEEVQKSLV 55


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,331,619
Number of Sequences: 27780
Number of extensions: 277701
Number of successful extensions: 804
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1708383636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)