Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0403
         (587 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   7.7  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    21   7.7  

>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 164 FKSIYYFRYPLVAYTKC 114
           FK+  YF Y  VA  KC
Sbjct: 48  FKTRTYFIYAFVAPVKC 64


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 477  SMAGLGSCLLCS 442
            S+AGL  C+LC+
Sbjct: 1112 SLAGLFKCMLCT 1123


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 477  SMAGLGSCLLCS 442
            S+AGL  C+LC+
Sbjct: 1112 SLAGLFKCMLCT 1123


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 164 FKSIYYFRYPLVAYTKC 114
           FK+  YF Y  VA  KC
Sbjct: 281 FKTRTYFIYAFVAPVKC 297


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = -1

Query: 164 FKSIYYFRYPLVAYTKC 114
           FK+  YF Y  VA  KC
Sbjct: 281 FKTRTYFIYAFVAPVKC 297


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 477  SMAGLGSCLLCS 442
            S+AGL  C+LC+
Sbjct: 1112 SLAGLFKCMLCT 1123


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = -3

Query: 477  SMAGLGSCLLCS 442
            S+AGL  C+LC+
Sbjct: 1112 SLAGLFKCMLCT 1123


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -3

Query: 276 NLFTTQSKIASLRVDQIINISQ*SKTAILLI 184
           N FT+  +I +L +   + IS   +TAI L+
Sbjct: 256 NFFTSTLEIDNLYLKHKLEISSLVQTAITLV 286


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 125,039
Number of Sequences: 336
Number of extensions: 2432
Number of successful extensions: 11
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14726181
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)