Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0403
         (587 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          22   3.9  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      22   3.9  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   3.9  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    21   6.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   6.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   6.8  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   9.0  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    21   9.0  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   9.0  

>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 12  GGPYARLPTRAIKKNYSEYRY 74
           GG Y RL  R    NY  + Y
Sbjct: 483 GGMYLRLKARRACMNYERFTY 503


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +3

Query: 12  GGPYARLPTRAIKKNYSEYRY 74
           GG Y RL  R    NY  + Y
Sbjct: 483 GGMYLRLKARRACMNYERFTY 503


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = -1

Query: 185 LNFNTAHFKSIYYFRYPLVAYTKC 114
           LNFN  +F+ +      L+ YT+C
Sbjct: 388 LNFNEVNFRILNAPVNQLIRYTRC 411


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 178 KFN**NCCFRLLTNINYL 231
           K+N  N C +L  NINY+
Sbjct: 97  KYNYNNNCKKLYYNINYI 114


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 450 VSRTLNLPYFKTNVFSVWKLRHLVADAS 533
           V+R +   YF++N      L+HL+  AS
Sbjct: 386 VARLIRNYYFESNKIDETTLKHLIDVAS 413


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +3

Query: 450 VSRTLNLPYFKTNVFSVWKLRHLVADAS 533
           V+R +   YF++N      L+HL+  AS
Sbjct: 386 VARLIRNYYFESNKIDETTLKHLIDVAS 413


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -1

Query: 518 KMSQFPYRKNICLKVWQV 465
           K  + PYR NIC K + V
Sbjct: 86  KEGEDPYRCNICGKTFAV 103


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 12/33 (36%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -1

Query: 209 NRKQQFY*LNFNTAHFKSIYYFRYPL-VAYTKC 114
           N+++  Y  N N      IY  RYPL  + +KC
Sbjct: 38  NKEECDYYQNLNLGEIYYIYNPRYPLPYSGSKC 70


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 5/8 (62%), Positives = 8/8 (100%)
 Frame = +2

Query: 482 DKCFFCME 505
           DKC+FC++
Sbjct: 425 DKCYFCLD 432


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,686
Number of Sequences: 438
Number of extensions: 2721
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17115420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)