Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0402
         (695 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    27   0.19 
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   1.8  
AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory recept...    23   2.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    23   3.2  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   3.2  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    22   4.2  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          22   5.5  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 26.6 bits (56), Expect = 0.19
 Identities = 9/24 (37%), Positives = 16/24 (66%)
 Frame = -2

Query: 382 ANLLQYLCIAYCFISGCLIIFNKI 311
           +NLL+ +C   C +S C+ +FN +
Sbjct: 188 SNLLKSVCADLCLLSECVDLFNSL 211


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = +3

Query: 78  PSFVLPIFRERNENDYDVLNRPLPG 152
           P  +  I+  +N  +YD  + PLPG
Sbjct: 52  PEALKKIYNIQNNFEYDTASLPLPG 76


>AM292348-1|CAL23160.2|  346|Tribolium castaneum gustatory receptor
           candidate 27 protein.
          Length = 346

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 11/37 (29%), Positives = 17/37 (45%)
 Frame = -1

Query: 224 FRRNFVEFVFFIHGFNPIPACLRASRQRSVKDIVIIF 114
           F++NF   V   H      A +R   Q+ + D  +IF
Sbjct: 81  FQKNFTNIVNLTHLLETQYAKIRTENQKKIFDESVIF 117


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 5/34 (14%)
 Frame = -2

Query: 562  YCELKNNSKVG*N*AV-----ECWEHLFLPEHSN 476
            + ++ NN K+G N  +      CW HL +  H+N
Sbjct: 1536 WIQVSNNVKLGQNFVLLDLDPACWYHLRVTAHNN 1569


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -3

Query: 369 NTFASPTVL*AVA*LFSIKYK*ASRDETNPPKQTPTNA 256
           N  +SP+VL A+  L    +   SR  ++ P   PT A
Sbjct: 721 NNGSSPSVLNAIEKLIEKSFDSRSRQNSSFPGHGPTTA 758


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.2 bits (45), Expect = 4.2
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 44  CRNDPNGDQVVSKFC 88
           C +DPNG+  + K C
Sbjct: 156 CNDDPNGNVPLGKSC 170


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -3

Query: 630 FPRWPLVTCYHLRITPNIVKVT 565
           FPRW       L   PN  +VT
Sbjct: 653 FPRWRQTLAMWLNHNPNYAEVT 674


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,852
Number of Sequences: 336
Number of extensions: 3632
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18322480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)