Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0402
         (695 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M62975-1|AAD40352.2|  261|Drosophila melanogaster RP140-upstream...    44   2e-04
AY058577-1|AAL13806.1|  261|Drosophila melanogaster LD27182p pro...    44   2e-04
AE014297-1803|AAF55023.1|  261|Drosophila melanogaster CG9852-PA...    44   2e-04
BT016042-1|AAV36927.1|  501|Drosophila melanogaster LP20978p pro...    30   2.6  
AE014134-545|AAF51155.1|  501|Drosophila melanogaster CG17259-PA...    30   2.6  
AE014296-3341|AAF51581.1|  900|Drosophila melanogaster CG5528-PA...    29   6.0  
AY061213-1|AAL28761.1|  153|Drosophila melanogaster LD16147p pro...    29   8.0  
AE014134-131|AAF51476.1|  153|Drosophila melanogaster CG2813-PA ...    29   8.0  

>M62975-1|AAD40352.2|  261|Drosophila melanogaster RP140-upstream
           protein.
          Length = 261

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 19/34 (55%), Positives = 25/34 (73%)
 Frame = +2

Query: 263 VGVCFGGFVSSREAYLYFIENNQATAYKTVGDAK 364
           +G  +GG   SR AY+ F+ENNQATA+K+  DAK
Sbjct: 80  IGAIYGGVTQSRVAYMNFMENNQATAFKSHFDAK 113


>AY058577-1|AAL13806.1|  261|Drosophila melanogaster LD27182p
           protein.
          Length = 261

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 19/34 (55%), Positives = 25/34 (73%)
 Frame = +2

Query: 263 VGVCFGGFVSSREAYLYFIENNQATAYKTVGDAK 364
           +G  +GG   SR AY+ F+ENNQATA+K+  DAK
Sbjct: 80  IGAIYGGVTQSRVAYMNFMENNQATAFKSHFDAK 113



 Score = 29.9 bits (64), Expect = 3.5
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = +3

Query: 159 QTGWDRVKAMYKKNEFDEVSPELHTVVQS 245
           +TG +R+K M+  +EF  +S EL++V Q+
Sbjct: 45  ETGLERLKQMFTIDEFGSISSELNSVYQA 73


>AE014297-1803|AAF55023.1|  261|Drosophila melanogaster CG9852-PA
           protein.
          Length = 261

 Score = 44.4 bits (100), Expect = 2e-04
 Identities = 19/34 (55%), Positives = 25/34 (73%)
 Frame = +2

Query: 263 VGVCFGGFVSSREAYLYFIENNQATAYKTVGDAK 364
           +G  +GG   SR AY+ F+ENNQATA+K+  DAK
Sbjct: 80  IGAIYGGVTQSRVAYMNFMENNQATAFKSHFDAK 113



 Score = 29.9 bits (64), Expect = 3.5
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = +3

Query: 159 QTGWDRVKAMYKKNEFDEVSPELHTVVQS 245
           +TG +R+K M+  +EF  +S EL++V Q+
Sbjct: 45  ETGLERLKQMFTIDEFGSISSELNSVYQA 73


>BT016042-1|AAV36927.1|  501|Drosophila melanogaster LP20978p
           protein.
          Length = 501

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = -1

Query: 170 PACLRASRQRSVKDIVIIFISFTKNW*DKTWRQPDHRSDHFDKI 39
           P  +R ++++  KD+ ++     K   D  WRQ  HR+D+ +K+
Sbjct: 16  PDLVRENQKKRFKDVALVETVIAK---DTEWRQCRHRADNLNKV 56


>AE014134-545|AAF51155.1|  501|Drosophila melanogaster CG17259-PA
           protein.
          Length = 501

 Score = 30.3 bits (65), Expect = 2.6
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = -1

Query: 170 PACLRASRQRSVKDIVIIFISFTKNW*DKTWRQPDHRSDHFDKI 39
           P  +R ++++  KD+ ++     K   D  WRQ  HR+D+ +K+
Sbjct: 16  PDLVRENQKKRFKDVALVETVIAK---DTEWRQCRHRADNLNKV 56


>AE014296-3341|AAF51581.1|  900|Drosophila melanogaster CG5528-PA
           protein.
          Length = 900

 Score = 29.1 bits (62), Expect = 6.0
 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 9   SCLLLSKRERDLVEMIRTVIRLSPSFVLPIFRERNENDYD-VLNRPLPGGPQTG 167
           S  LLS   ++ V     + +  PS V  IF    +ND   VLN  LP   +TG
Sbjct: 724 SAALLSSASKESVNKFTNISQRDPSAVYDIFISYCQNDRTWVLNELLPNVEETG 777


>AY061213-1|AAL28761.1|  153|Drosophila melanogaster LD16147p
           protein.
          Length = 153

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +1

Query: 109 EMKMITMSLTDLCLEALRQAGIGLKPCIKKTNSTKFLLNCIQLCNP 246
           E+ ++ ++   LC +    AG+    C  +T +T+  LN I+ C P
Sbjct: 5   EIAVVLVAAVYLCSQVNFVAGLECYVCSNQTGNTEKCLNTIKTCEP 50


>AE014134-131|AAF51476.1|  153|Drosophila melanogaster CG2813-PA
           protein.
          Length = 153

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +1

Query: 109 EMKMITMSLTDLCLEALRQAGIGLKPCIKKTNSTKFLLNCIQLCNP 246
           E+ ++ ++   LC +    AG+    C  +T +T+  LN I+ C P
Sbjct: 5   EIAVVLVAAVYLCSQVNFVAGLECYVCSNQTGNTEKCLNTIKTCEP 50


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,779,899
Number of Sequences: 53049
Number of extensions: 614617
Number of successful extensions: 1394
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1394
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3046624548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)