Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0402
(695 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein. 24 1.6
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 23 2.8
DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 vari... 23 3.7
DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 vari... 23 3.7
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 22 4.8
AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II ... 22 6.4
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 8.5
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 8.5
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 8.5
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 8.5
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 8.5
AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine beta-sy... 21 8.5
>DQ011226-1|AAY63895.1| 471|Apis mellifera Rh-like protein protein.
Length = 471
Score = 23.8 bits (49), Expect = 1.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 281 LRNKHQQMHAQCGLHN 234
L KH ++H CG+HN
Sbjct: 318 LIQKHLKIHDTCGVHN 333
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 23.0 bits (47), Expect = 2.8
Identities = 10/34 (29%), Positives = 20/34 (58%)
Frame = +3
Query: 27 KRERDLVEMIRTVIRLSPSFVLPIFRERNENDYD 128
KRER+ + + + LS +++ I N+N+Y+
Sbjct: 70 KRERERSKERKIISSLSNNYISNISNYNNDNNYN 103
>DQ384991-1|ABD51779.1| 94|Apis mellifera allergen Api m 6 variant
2 precursor protein.
Length = 94
Score = 22.6 bits (46), Expect = 3.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +1
Query: 226 CIQLCNPHCAC 258
CI++C P C C
Sbjct: 63 CIKICAPGCVC 73
>DQ384990-1|ABD51778.1| 92|Apis mellifera allergen Api m 6 variant
1 precursor protein.
Length = 92
Score = 22.6 bits (46), Expect = 3.7
Identities = 6/11 (54%), Positives = 8/11 (72%)
Frame = +1
Query: 226 CIQLCNPHCAC 258
CI++C P C C
Sbjct: 63 CIKICAPGCVC 73
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 22.2 bits (45), Expect = 4.8
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +3
Query: 27 KRERDLVEMIRTVIRLSPSFVLPIFRERNENDYD 128
KRER+ + + + LS +++ I N N+Y+
Sbjct: 70 KRERERSKERKIISSLSNNYISNISNYNNNNNYN 103
>AB013287-1|BAA87893.1| 190|Apis mellifera calmodulin kinase II
protein.
Length = 190
Score = 21.8 bits (44), Expect = 6.4
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Frame = +3
Query: 189 YKKNEFDEVSPELHTVVQSTLCVH--LLVFVSEDLSH 293
Y E+D V+PE ++ L V+ + SE L H
Sbjct: 131 YPSPEWDTVTPEAKNLINQMLTVNPSKRITASEALKH 167
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = -2
Query: 385 YANLLQYLCIAY 350
YA+LL+++C+ Y
Sbjct: 375 YASLLEFVCVNY 386
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = -2
Query: 385 YANLLQYLCIAY 350
YA+LL+++C+ Y
Sbjct: 344 YASLLEFVCVNY 355
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = -2
Query: 385 YANLLQYLCIAY 350
YA+LL+++C+ Y
Sbjct: 395 YASLLEFVCVNY 406
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/12 (50%), Positives = 11/12 (91%)
Frame = -2
Query: 385 YANLLQYLCIAY 350
YA+LL+++C+ Y
Sbjct: 344 YASLLEFVCVNY 355
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -3
Query: 630 FPRWPLVTCYHLRITPNIVKVTS 562
FP+W V L +PN +VT+
Sbjct: 651 FPKWLQVLALWLNHSPNYDQVTN 673
>AB244761-1|BAE66603.1| 504|Apis mellifera cystathionine
beta-synthase protein.
Length = 504
Score = 21.4 bits (43), Expect = 8.5
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = -3
Query: 591 ITPNIVKVTSIVN*KIIQKWVKIK 520
+ IVK T V+ +++++VK+K
Sbjct: 427 VISGIVKCTDFVDKAMVKQYVKVK 450
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,544
Number of Sequences: 438
Number of extensions: 3848
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21317625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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