Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0401
         (746 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    33   0.003
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    25   0.85 
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.6  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.6  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   7.9  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 32.7 bits (71), Expect = 0.003
 Identities = 29/107 (27%), Positives = 42/107 (39%), Gaps = 4/107 (3%)
 Frame = -1

Query: 533 LHFWSNLLSMNCICYGVFSSASIRQACINC*CSYSFRFIYSLCDCVFGGFNERCAFLNCR 354
           L F+  L+ + CI Y  ++        +   C Y F +++ L  C F  F     FL C 
Sbjct: 226 LLFYCVLIILLCIYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLC- 284

Query: 353 SCYVFCCVYCSTNCVCY-C---VFCGTD*RCAFFYSRLATLFVASTV 225
             Y F C      C+ Y C   +   T   CAF    L + F  + V
Sbjct: 285 -IYYFYCALIILLCIYYFCRAFIIFPTHFYCAFSLYPLKSTFYLNVV 330


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 0.85
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -1

Query: 743 PTYDAPLSYTDPAVDLYFQRY 681
           P Y  P SY DP  + Y+ +Y
Sbjct: 25  PAYSPPPSYCDPWYNPYYYQY 45


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 437 SYSFRFIYSLCDCVFGG 387
           S+ F  + ++C C+FGG
Sbjct: 325 SFGFLIVRTVCLCLFGG 341


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 437 SYSFRFIYSLCDCVFGG 387
           S+ F  + ++C C+FGG
Sbjct: 325 SFGFLIVRTVCLCLFGG 341


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 447 LLMQLQFSFYLQFVRL 400
           LLM+LQ+  YL  +R+
Sbjct: 192 LLMELQYCHYLNILRV 207


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 447 LLMQLQFSFYLQFVRL 400
           LLM+LQ+  YL  +R+
Sbjct: 192 LLMELQYCHYLNILRV 207


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,431
Number of Sequences: 336
Number of extensions: 2585
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)