Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0401
         (746 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.           33   0.012
AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.           26   1.1  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   3.3  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   3.3  
AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin s...    23   7.6  
AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein p...    23   7.6  

>AF046924-1|AAC08530.1|  122|Anopheles gambiae mucin protein.
          Length = 122

 Score = 32.7 bits (71), Expect = 0.012
 Identities = 20/66 (30%), Positives = 29/66 (43%)
 Frame = +3

Query: 261 VEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSLIETAKDTVAQTVDKTKTVAA 440
           ++  T+ +  A  TVA T +T   TT    A       +  +T   TVA     T TVA+
Sbjct: 22  IDPPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVAPGQTTTTTVAS 81

Query: 441 SAVDTS 458
             V T+
Sbjct: 82  GPVTTT 87



 Score = 25.8 bits (54), Expect = 1.4
 Identities = 16/53 (30%), Positives = 22/53 (41%)
 Frame = +1

Query: 4   TVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTLANTVHTTVDTTKNVAAST 162
           TVA T +TTV  T     A  +  +T V   + T        V TT +   +T
Sbjct: 42  TVAPTTTTTVAPTTTTTVAPGQTTTTTVAPGQTTTTTVASGPVTTTGSTDTTT 94



 Score = 24.2 bits (50), Expect = 4.3
 Identities = 16/58 (27%), Positives = 23/58 (39%)
 Frame = +3

Query: 273 TSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSLIETAKDTVAQTVDKTKTVAASA 446
           T++  T   TVA T +TTV   +    +     T+    A   V  T     T  +SA
Sbjct: 41  TTVAPTTTTTVAPTTTTTVAPGQTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTPSSA 98


>AJ007394-1|CAA07489.1|  112|Anopheles gambiae mucin protein.
          Length = 112

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 15/62 (24%), Positives = 26/62 (41%)
 Frame = +3

Query: 255 SAVEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSLIETAKDTVAQTVDKTKTV 434
           + V   T+ +     TVA T +TTV  T     +  +  T+ + +   T   + D T   
Sbjct: 27  TTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTPS 86

Query: 435 AA 440
           +A
Sbjct: 87  SA 88



 Score = 25.4 bits (53), Expect = 1.9
 Identities = 19/74 (25%), Positives = 28/74 (37%), Gaps = 4/74 (5%)
 Frame = +3

Query: 261 VEKGTSLIGTAKDTVANTVSTTVDTTKNVAASAVEKGTSLIETAKDTVAQ----TVDKTK 428
           ++  T+ +  A  TVA T +T   TT    A       +  +T   TVA     T   T 
Sbjct: 22  IDPPTTTVAPATTTVAPTTTTVAPTTTTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTD 81

Query: 429 TVAASAVDTSLSYA 470
           T   S+    +  A
Sbjct: 82  TTTPSSAPQDVKAA 95



 Score = 24.6 bits (51), Expect = 3.3
 Identities = 14/46 (30%), Positives = 21/46 (45%)
 Frame = +1

Query: 4   TVANTVSTTVDATKNVAAAVVEKGSTIVGTAKDTLANTVHTTVDTT 141
           TVA T +TTV  T     A  +  +T V +   T   +  TT  ++
Sbjct: 42  TVAPTTTTTVAPTTTTTVAPGQTTTTTVASGPVTTTGSTDTTTPSS 87


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 11/31 (35%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
 Frame = -1

Query: 386 FNERCAFLNCRSCYVFCC---VYCSTNCVCY 303
           +N  C F  C  C    C   + C  NC CY
Sbjct: 772 YNTHC-FALCHCCEFDACDCEMTCPNNCACY 801


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = +1

Query: 148 VAASTVEKGASLIGTAKDTVATTLNTTVD 234
           V   T+  GASLIG A D V   + + +D
Sbjct: 628 VLGLTLYDGASLIGFADDIVLVAVGSRID 656


>AF492464-1|AAM11657.1|  803|Anopheles gambiae beta nu integrin
           subunit AgBnu protein.
          Length = 803

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 2/25 (8%)
 Frame = -2

Query: 577 STVNERRSFVIC--RSRCIFGQIYC 509
           S  +E R+  IC  R  CI GQ YC
Sbjct: 524 SVGDELRTGPICSDRGECICGQCYC 548


>AB097148-2|BAC82628.1| 1077|Anopheles gambiae pol-like protein
           protein.
          Length = 1077

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
 Frame = +3

Query: 297 DTVANTVSTTVDTTKNVAASAVEKGTSLIE-TAKDTVAQTVDKTKTVAASAVDTSLSYAG 473
           DTV N + T V+ + N+A+  +   +S  +  A  T  +T+D           T L+  G
Sbjct: 2   DTVTNNIRTIVNGSCNIASININTISSATKLEALKTFIRTMDLDVIFLQEVYHTDLALPG 61


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,738
Number of Sequences: 2352
Number of extensions: 11564
Number of successful extensions: 37
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76923555
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)