Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= e40h0400
(728 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 173 2e-43
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 126 1e-29
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 120 1e-27
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 117 9e-27
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 105 3e-23
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 6e-23
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 99 3e-21
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 98 7e-21
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 97 1e-20
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 97 1e-20
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 95 7e-20
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 93 2e-19
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 93 3e-19
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 87 2e-17
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 85 4e-17
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 84 1e-16
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 5e-16
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 81 9e-16
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 78 8e-15
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 2e-14
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 77 2e-14
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 75 4e-14
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 75 6e-14
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 75 8e-14
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 68 7e-12
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 67 1e-11
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 65 6e-11
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 61 8e-10
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 60 2e-09
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 59 3e-09
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 59 4e-09
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 1e-08
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 57 1e-08
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 54 1e-07
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 53 2e-07
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 53 3e-07
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 5e-07
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 52 5e-07
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 52 6e-07
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 50 3e-06
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 48 1e-05
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 47 2e-05
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 46 2e-05
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 46 2e-05
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 46 4e-05
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 45 5e-05
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 45 7e-05
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 44 1e-04
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 44 1e-04
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 44 2e-04
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 42 4e-04
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 42 7e-04
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 42 7e-04
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 41 9e-04
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 41 0.001
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 41 0.001
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 40 0.003
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.005
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 37 0.015
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 37 0.015
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 37 0.019
SB_39298| Best HMM Match : Ras (HMM E-Value=0.11) 37 0.019
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 37 0.019
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.025
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 36 0.034
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.034
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 36 0.034
SB_214| Best HMM Match : Arf (HMM E-Value=0) 36 0.034
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 36 0.044
SB_58754| Best HMM Match : PucR (HMM E-Value=5.5) 34 0.14
SB_18664| Best HMM Match : PucR (HMM E-Value=5.5) 34 0.14
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 33 0.18
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 33 0.18
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.24
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 33 0.24
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 32 0.41
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 32 0.55
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 31 0.72
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 31 0.72
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 31 0.72
SB_55159| Best HMM Match : Ribosomal_S17e (HMM E-Value=2.8) 31 0.96
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 31 0.96
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 29 2.9
SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0) 29 2.9
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 29 3.9
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.9
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 29 5.1
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_25230| Best HMM Match : NACHT (HMM E-Value=0.0015) 28 6.7
SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96) 28 6.7
SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06) 28 8.9
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 173 bits (420), Expect = 2e-43
Identities = 77/85 (90%), Positives = 84/85 (98%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYAC 433
L+GKTIKLQIWDTAGQERFRTITSSYYRGAHGII+VYD TDQ+SF+NVKQWL+EIDRYAC
Sbjct: 73 LDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAC 132
Query: 434 DNVNKLLVGNKCDLTTKKVVDFSTA 508
+NVNKLLVGNKCDLTTKKVVDF+TA
Sbjct: 133 ENVNKLLVGNKCDLTTKKVVDFTTA 157
Score = 83.4 bits (197), Expect = 2e-16
Identities = 47/70 (67%), Positives = 49/70 (70%), Gaps = 21/70 (30%)
Frame = +3
Query: 108 PEYDYLFKLLLIGDSGVGKSCLLLRFA---------------------DDTYTESYISTI 224
PEYDYLFKLLLIGDSGVGKSCLLLRFA DDTYTESYISTI
Sbjct: 3 PEYDYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTI 62
Query: 225 GVDFKIRTVD 254
GVDFKIRT++
Sbjct: 63 GVDFKIRTIE 72
Score = 83.0 bits (196), Expect = 2e-16
Identities = 38/64 (59%), Positives = 45/64 (70%)
Frame = +1
Query: 511 QYAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARVGPPSTGAAPAGHVKIDQGQPIDTG 690
+YAE LG+PFLETSAKN+TNVEQAFMTMAAEIK R+GP +VKI+ P+ G
Sbjct: 159 EYAESLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPSPAPQGAGSNVKINSSTPVKQG 218
Query: 691 KSSC 702
C
Sbjct: 219 GGGC 222
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 126 bits (305), Expect = 1e-29
Identities = 51/85 (60%), Positives = 70/85 (82%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYAC 433
++GKTIKLQIWDTAGQERFRT+T++YYR AHGI+++YD + ++F ++ QWLEE+ YAC
Sbjct: 52 VDGKTIKLQIWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYAC 111
Query: 434 DNVNKLLVGNKCDLTTKKVVDFSTA 508
+ VN +LVGNKCDL + V ++TA
Sbjct: 112 EGVNTILVGNKCDLIDCRQVGYNTA 136
Score = 89.0 bits (211), Expect = 3e-18
Identities = 41/47 (87%), Positives = 45/47 (95%)
Frame = +3
Query: 111 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTV 251
EYDYLFKLLLIGDSGVGKS LLLRFADDT++ +YISTIGVDFKIRT+
Sbjct: 4 EYDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTL 50
Score = 58.8 bits (136), Expect = 4e-09
Identities = 30/69 (43%), Positives = 43/69 (62%), Gaps = 5/69 (7%)
Frame = +1
Query: 511 QYAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARVGPPST-----GAAPAGHVKIDQGQ 675
++AE+L I F+ETSAK+STNVE F TMAAE+KA++G P T + A +K+ G
Sbjct: 138 EFAEKLDISFIETSAKDSTNVESVFRTMAAELKAKLGSPLTSPTAGNSTDACPLKLSDGV 197
Query: 676 PIDTGKSSC 702
++ C
Sbjct: 198 SVEQSHKCC 206
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 120 bits (289), Expect = 1e-27
Identities = 53/81 (65%), Positives = 68/81 (83%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYAC 433
++G+ +KLQIWDTAGQERFRTITS+YYRG HG+I+VYD T D+F NVK+WL EID+ C
Sbjct: 21 IDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKRWLHEIDQ-NC 79
Query: 434 DNVNKLLVGNKCDLTTKKVVD 496
D+V ++LVGNK D +KKVV+
Sbjct: 80 DDVIRILVGNKDDCPSKKVVE 100
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/19 (68%), Positives = 18/19 (94%)
Frame = +3
Query: 198 YTESYISTIGVDFKIRTVD 254
++ SYI+TIGVDFKIRT++
Sbjct: 2 FSGSYITTIGVDFKIRTIN 20
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 117 bits (282), Expect = 9e-27
Identities = 49/90 (54%), Positives = 72/90 (80%)
Frame = +2
Query: 260 GKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDN 439
GK IKLQIWDTAGQERF TIT++YYRGA GI++VYD T++ SFSN+ +WL++ID +A ++
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANED 61
Query: 440 VNKLLVGNKCDLTTKKVVDFSTASNMRNNW 529
V ++LVGNKCD+ K+V+ + + +++
Sbjct: 62 VKRMLVGNKCDMYDKRVISQTKGEQLASSY 91
Score = 38.3 bits (85), Expect = 0.006
Identities = 19/50 (38%), Positives = 28/50 (56%)
Frame = +1
Query: 511 QYAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARVGPPSTGAAPAGHVK 660
Q A GI F+ETSA ++ NVE++F+ + +I V PP+ G K
Sbjct: 86 QLASSYGISFIETSALSNINVEKSFVVLTEDILNAVCPPTVEETEKGKGK 135
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 105 bits (253), Expect = 3e-23
Identities = 48/87 (55%), Positives = 62/87 (71%)
Frame = +2
Query: 269 IKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNK 448
+KLQIWDTAGQERFRTIT SYYR +G+II YD T D+F NV +W E++ +YA +N K
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIK 154
Query: 449 LLVGNKCDLTTKKVVDFSTASNMRNNW 529
LLVGNK DL ++ V A N +++
Sbjct: 155 LLVGNKKDLEREREVSLEDAVNCASHY 181
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 541 LETSAKNSTNVEQAFMTMAAEIKAR 615
LETSAK++TN+E AF +A E+K R
Sbjct: 187 LETSAKDATNIEAAFYRLARELKNR 211
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 104 bits (250), Expect = 6e-23
Identities = 45/85 (52%), Positives = 63/85 (74%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYAC 433
++G+ +KLQIWDTAGQERFR+IT SYY A G+I+ YD T++ SF ++ QWL++ +RY
Sbjct: 51 VDGEKVKLQIWDTAGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNRYTS 110
Query: 434 DNVNKLLVGNKCDLTTKKVVDFSTA 508
+V +VGNK DL+T + VDF A
Sbjct: 111 KDVLIAIVGNKSDLSTNRKVDFHHA 135
Score = 57.6 bits (133), Expect = 1e-08
Identities = 24/48 (50%), Positives = 35/48 (72%)
Frame = +3
Query: 111 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVD 254
+Y YLFK++L+GD+ VGK+CL+ +F + + TIGVDF I+TVD
Sbjct: 3 DYSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVD 50
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 99.1 bits (236), Expect = 3e-21
Identities = 43/81 (53%), Positives = 59/81 (72%)
Frame = +2
Query: 251 RLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYA 430
++ GK IK Q+WDTAGQER+R ITS+YYRGA G ++VYD T Q +F +V++WL E+ +A
Sbjct: 55 QVEGKIIKAQVWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHA 114
Query: 431 CDNVNKLLVGNKCDLTTKKVV 493
+ +LVGNKCDL + V
Sbjct: 115 DPTIVVMLVGNKCDLKHLRAV 135
Score = 56.4 bits (130), Expect = 2e-08
Identities = 26/46 (56%), Positives = 34/46 (73%)
Frame = +3
Query: 114 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTV 251
YDYL+K++LIGDSGVGKS LL RF + + STIGV+F R++
Sbjct: 9 YDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSI 54
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 97.9 bits (233), Expect = 7e-21
Identities = 57/127 (44%), Positives = 78/127 (61%)
Frame = +2
Query: 113 IRLFIQTTPDW*LWSWEIMSVAKIR**YLHRELHQYYWRGL*N*DCRLNGKTIKLQIWDT 292
+RL +Q D S +I+S + IR REL Y R K + W+
Sbjct: 325 VRLLVQDLIDRGFGSRKILSSSSIRRRLPQRELPDYD-------RSRFQNKNDESG-WE- 375
Query: 293 AGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCD 472
AGQERFRTITSSYYRGAHG++IVYD T ++S++N+ +WL E++ YA + V+ +LVGNK D
Sbjct: 376 AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGNKID 435
Query: 473 LTTKKVV 493
L T + V
Sbjct: 436 LDTDREV 442
Score = 31.1 bits (67), Expect = 0.96
Identities = 12/29 (41%), Positives = 22/29 (75%)
Frame = +1
Query: 511 QYAEQLGIPFLETSAKNSTNVEQAFMTMA 597
++A +PF+ETSAK + NV++AF+ ++
Sbjct: 449 EWAALHDMPFVETSAKGAKNVKEAFLVLS 477
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 97.5 bits (232), Expect = 1e-20
Identities = 40/87 (45%), Positives = 60/87 (68%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYAC 433
L+ T+K +IWDTAGQER+ ++ YYRGA I+VYD T+QD+F+ K W++E+ R A
Sbjct: 65 LDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQAS 124
Query: 434 DNVNKLLVGNKCDLTTKKVVDFSTASN 514
N+ L GNK DL +K++V++ A +
Sbjct: 125 PNIVIALSGNKADLASKRMVEYEDAQS 151
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/42 (52%), Positives = 28/42 (66%)
Frame = +3
Query: 126 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTV 251
FKL+L+G+S VGKS L+LRF + E STIG F +TV
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTV 63
Score = 33.5 bits (73), Expect = 0.18
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 514 YAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARVG 621
YAE G+ F+ETSAK + NV F+ + + K + G
Sbjct: 152 YAEDNGLLFMETSAKTAMNVNDIFLAIGKKGKKKKG 187
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 97.1 bits (231), Expect = 1e-20
Identities = 43/86 (50%), Positives = 61/86 (70%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYAC 433
+ GK++KLQIWDTAGQERFR++T SYYRGA G ++VYD + +++F+++ WL + A
Sbjct: 139 VGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTDARTLAS 198
Query: 434 DNVNKLLVGNKCDLTTKKVVDFSTAS 511
N+ +LVGNK DL + V F AS
Sbjct: 199 PNIVIILVGNKKDLDADREVTFLEAS 224
Score = 27.9 bits (59), Expect = 8.9
Identities = 12/36 (33%), Positives = 22/36 (61%)
Frame = +1
Query: 511 QYAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARV 618
++A++ + FLETSA NVE+ F+ + I ++
Sbjct: 225 RFAQENELMFLETSALTGENVEEGFLKCSRTILNKI 260
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 94.7 bits (225), Expect = 7e-20
Identities = 41/89 (46%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYAC 433
++G +KLQ WDTAGQE+FR IT SYYR A +I+V+D T++ +F+++ QWL + +Y
Sbjct: 55 IHGDRVKLQCWDTAGQEKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTN 114
Query: 434 DNVNKLLVGNKCDLT-TKKVVDFSTASNM 517
N+ K+LVGNK DL + V+ +A+N+
Sbjct: 115 KNILKVLVGNKTDLKGASRKVNTRSAANL 143
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +3
Query: 120 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVD 254
Y FK+L++GD GVGK+ L+ RF + ++ ST+GVD R +D
Sbjct: 10 YSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLD 54
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 93.1 bits (221), Expect = 2e-19
Identities = 39/74 (52%), Positives = 55/74 (74%), Gaps = 1/74 (1%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYAC 433
+ G KL IWDTAGQERFRT+T SYYRGA G+I+VYD +++F +++WL E++ Y+
Sbjct: 52 VEGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYST 111
Query: 434 -DNVNKLLVGNKCD 472
++ K+LVGNK D
Sbjct: 112 KKDIVKMLVGNKID 125
Score = 58.8 bits (136), Expect = 4e-09
Identities = 25/41 (60%), Positives = 34/41 (82%)
Frame = +3
Query: 129 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTV 251
K+L++G+SGVGKS LLLRF DDT+ +TIGVDFK++T+
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTL 50
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 92.7 bits (220), Expect = 3e-19
Identities = 42/95 (44%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYAC 433
+NG+ I +Q+WDTAGQERFR+IT Y+R A GI+I YD T + SF+N+K+W+ ++ A
Sbjct: 940 VNGQCIAIQLWDTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLKKWMVSVEEGAE 999
Query: 434 DNVNKLLVGNKCDLT---TKKVVDFSTASNMRNNW 529
+ V K+++GNK DL +VV N+ N +
Sbjct: 1000 EGVAKMVLGNKTDLAEDEESRVVKTIDGKNLANQY 1034
Score = 54.8 bits (126), Expect = 7e-08
Identities = 24/44 (54%), Positives = 34/44 (77%)
Frame = +3
Query: 123 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVD 254
+FK++ IGDSGVGKS L RF D + S+ +TIGVDF+I+T++
Sbjct: 896 VFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMN 939
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 86.6 bits (205), Expect = 2e-17
Identities = 36/83 (43%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Frame = +2
Query: 245 DCRLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEID 421
D L+GK +KLQ+WDTAG+E++R ++ S++RGA G ++V+D + ++SF +++ WL E
Sbjct: 51 DFDLDGKKVKLQLWDTAGEEKYRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFH 110
Query: 422 RYACDNVNKLLVGNKCDLTTKKV 490
+ + + +LVGNKCD KKV
Sbjct: 111 KVSGSDTITILVGNKCDKKDKKV 133
Score = 53.6 bits (123), Expect = 2e-07
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +3
Query: 117 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVD 254
DY+FK+L++GD VGKS L+ RF DD + +TIGVDF I D
Sbjct: 8 DYVFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFD 53
Score = 31.1 bits (67), Expect = 0.96
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 532 IPFLETSAKNSTNVEQAFMTMAAEI 606
+ +LETSAK++TNV +AF MA ++
Sbjct: 147 LSWLETSAKDNTNVNEAFEAMARKL 171
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 85.4 bits (202), Expect = 4e-17
Identities = 42/76 (55%), Positives = 54/76 (71%), Gaps = 1/76 (1%)
Frame = +2
Query: 269 IKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACD-NVN 445
IKLQIWDTAGQERFR+IT SYYR G +I+YD T++DSF NV W +E + + V
Sbjct: 63 IKLQIWDTAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVV 122
Query: 446 KLLVGNKCDLTTKKVV 493
+LVG+K D +K+VV
Sbjct: 123 FMLVGHKIDKESKRVV 138
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/49 (46%), Positives = 35/49 (71%)
Frame = +3
Query: 108 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVD 254
P+Y Y F+++LIGDS VGKS LL +F + + E+ T+GVDF +R ++
Sbjct: 8 PKYFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLE 56
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/31 (45%), Positives = 23/31 (74%)
Frame = +1
Query: 514 YAEQLGIPFLETSAKNSTNVEQAFMTMAAEI 606
+AE + F+ETSAK N+E+AF+++A E+
Sbjct: 146 FAEAHNMMFIETSAKVLCNIEEAFISVAEEV 176
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 84.2 bits (199), Expect = 1e-16
Identities = 37/84 (44%), Positives = 54/84 (64%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYAC 433
++GKT LQ+WDTAGQERFR+I SY+R A G++++YD T + SF +V+ W+E I+
Sbjct: 486 VDGKTYALQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVEAIEESCS 545
Query: 434 DNVNKLLVGNKCDLTTKKVVDFST 505
V +L GNK D+ + T
Sbjct: 546 KPVPIMLCGNKIDIRQSAAAENKT 569
Score = 44.4 bits (100), Expect = 1e-04
Identities = 18/43 (41%), Positives = 31/43 (72%)
Frame = +3
Query: 123 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTV 251
+FK++L GD+ VGKS +LR + + + ST+GVDF+++T+
Sbjct: 442 MFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTL 484
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 81.8 bits (193), Expect = 5e-16
Identities = 38/87 (43%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQERFR-TITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYA 430
LNG+ +KLQ+WDTAGQERFR ++ YYR + ++ +YD T + SF + W+ E +A
Sbjct: 90 LNGEFVKLQLWDTAGQERFRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHA 149
Query: 431 -CDNVNKLLVGNKCDLTTKKVVDFSTA 508
+V K+L+GNKCDL ++ V + A
Sbjct: 150 YSGDVPKILIGNKCDLGLERTVSSNIA 176
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/37 (51%), Positives = 25/37 (67%)
Frame = +3
Query: 126 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDF 236
FK+++IGDS VGK+CL R + E +TIGVDF
Sbjct: 47 FKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDF 83
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 81.0 bits (191), Expect = 9e-16
Identities = 34/87 (39%), Positives = 52/87 (59%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYAC 433
+N K K IWDTAGQERF+++ YYR A I+VYD T + +F +++ W+ E+ RY
Sbjct: 4 VNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRELQRYGP 63
Query: 434 DNVNKLLVGNKCDLTTKKVVDFSTASN 514
++ + GNKCD ++ V A +
Sbjct: 64 QDIVIAVAGNKCDKADQRDVQVQDAQD 90
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 77.8 bits (183), Expect = 8e-15
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Frame = +2
Query: 251 RLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYA 430
++ K + L +WDTAG ERFRT+T +YYRGAH I++++ D S + W+ + D +
Sbjct: 54 KIGEKQVTLSVWDTAGVERFRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDEF- 112
Query: 431 CDNVNKLLVGNKCDL----TTKKVVDFSTA 508
C + K+LV NK DL TT+ V F+++
Sbjct: 113 CPDALKVLVANKIDLDEQVTTESVELFASS 142
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/37 (43%), Positives = 27/37 (72%)
Frame = +3
Query: 123 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVD 233
LFK++L+G++GVGK+ L R ++ +T +TIG+D
Sbjct: 11 LFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGID 47
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 76.6 bits (180), Expect = 2e-14
Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Frame = +2
Query: 239 N*DCRLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEI 418
N D +L+G++ LQIWDTAGQERF+++ + +YRG+ ++VY D SF+N+ W +E
Sbjct: 250 NKDVKLDGESYTLQIWDTAGQERFKSLRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEF 309
Query: 419 DRYA----CDNVNKLLVGNKCDLTTKKVVDFSTASNMRNN 526
YA DN +L+GNK D+ + V S R N
Sbjct: 310 LYYADVRDQDNFPFILLGNKVDVEGRAVSQEEADSWCRQN 349
Score = 37.9 bits (84), Expect = 0.008
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Frame = +1
Query: 529 GIPFLETSAKNSTNVEQAFMTMAAEIKA-------RVGPPSTGAAPAGHVKIDQG 672
G+P+ ETSAK+STNV AF+ + + R G +TG +VK D+G
Sbjct: 351 GVPYFETSAKDSTNVNDAFIAAVKRLNSLEQNKANRSGFTATGGVNLANVKKDKG 405
Score = 30.7 bits (66), Expect = 1.3
Identities = 15/33 (45%), Positives = 18/33 (54%)
Frame = +3
Query: 138 LIGDSGVGKSCLLLRFADDTYTESYISTIGVDF 236
L D GVGKS L+ RF + TIGV+F
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEF 248
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 76.6 bits (180), Expect = 2e-14
Identities = 32/72 (44%), Positives = 51/72 (70%)
Frame = +2
Query: 299 QERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLT 478
QER+R ITS+YYRGA G ++VYD SF N+ +W+EE+ ++A D+++ +L+GNK DL
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLK 61
Query: 479 TKKVVDFSTASN 514
++++ SN
Sbjct: 62 HLRMIENRRGSN 73
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 75.4 bits (177), Expect = 4e-14
Identities = 29/61 (47%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Frame = +2
Query: 260 GKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYA-CD 436
G+ I LQ+WDTAGQERFR++T++++R A G ++V+D T + SF N++ WL ++ +A C+
Sbjct: 163 GQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTHAYCE 222
Query: 437 N 439
N
Sbjct: 223 N 223
Score = 48.8 bits (111), Expect = 4e-06
Identities = 19/45 (42%), Positives = 31/45 (68%)
Frame = +3
Query: 117 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTV 251
++L K L +GDSGVGK+ LL ++ D + ++ TIG+DF+ + V
Sbjct: 104 EFLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRV 148
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 74.9 bits (176), Expect = 6e-14
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = +2
Query: 257 NGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVK 400
N K +KLQIWDTAGQER+RTIT++YYRGA G I++YD T+++SF V+
Sbjct: 66 NDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFQAVQ 113
Score = 70.5 bits (165), Expect = 1e-12
Identities = 26/46 (56%), Positives = 41/46 (89%)
Frame = +3
Query: 114 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTV 251
+DY+FKLL+IG+S VGK+ L R+ADD++T +++ST+G+DFK++TV
Sbjct: 18 FDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTV 63
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 74.5 bits (175), Expect = 8e-14
Identities = 30/66 (45%), Positives = 49/66 (74%)
Frame = +2
Query: 299 QERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLT 478
QER+R ITS+YYRGA G ++VYD SF N+ +W+EE+ ++A D+++ +L+GNK DL
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLK 61
Query: 479 TKKVVD 496
++++
Sbjct: 62 HLRMIE 67
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/36 (47%), Positives = 25/36 (69%)
Frame = +1
Query: 511 QYAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARV 618
Q+A + G+ F+ETSA +STNV +AF + A I +V
Sbjct: 73 QFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFDKV 108
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 70.1 bits (164), Expect = 2e-12
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +2
Query: 269 IKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNK 448
++LQIWDTAGQERFR + SY R + +IV+D T+ SF +V W++ + +
Sbjct: 212 VRLQIWDTAGQERFRCLIHSYIRDSEAALIVFDITNYTSFESVGDWVKMVRDERGEKAVI 271
Query: 449 LLVGNKCDLTTKKVVDFSTA 508
++VGNK D + ++ V + A
Sbjct: 272 IIVGNKMDESDRRKVSYDVA 291
Score = 46.8 bits (106), Expect = 2e-05
Identities = 21/41 (51%), Positives = 27/41 (65%)
Frame = +3
Query: 129 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTV 251
K++ +GD GVGKS L RF D + E Y TIG+DF +TV
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTV 205
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/30 (40%), Positives = 22/30 (73%)
Frame = +1
Query: 517 AEQLGIPFLETSAKNSTNVEQAFMTMAAEI 606
AE+LG+ ++ETSAK+ NV+ F ++ ++
Sbjct: 295 AERLGLSYVETSAKSGYNVKLLFTKLSKDL 324
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 68.1 bits (159), Expect = 7e-12
Identities = 33/86 (38%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Frame = +2
Query: 257 NGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLE--EIDRYA 430
+ K IKL I DTAGQER+ +I +Y+RG G+ +V+D T + +F + +W++ A
Sbjct: 397 DNKKIKLTIGDTAGQERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWIDLARTTSGA 456
Query: 431 CDNVNKLLVGNKCDLTTKKVVDFSTA 508
N+ +LVGNK D+ + V +S A
Sbjct: 457 DSNIQLILVGNKKDMEDNRAVTYSRA 482
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/43 (41%), Positives = 30/43 (69%), Gaps = 1/43 (2%)
Frame = +3
Query: 108 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYI-STIGVD 233
P +DY FK L+IG+SGVGKSCL+ + + + ++ ST+ ++
Sbjct: 345 PNWDYEFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMN 387
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 67.3 bits (157), Expect = 1e-11
Identities = 29/74 (39%), Positives = 45/74 (60%)
Frame = +2
Query: 269 IKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNK 448
IK +WDTAGQE+F + YY II++D T + ++ NV W +++R C+N+
Sbjct: 81 IKFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLER-VCENIPI 139
Query: 449 LLVGNKCDLTTKKV 490
+L GNK D+ +KV
Sbjct: 140 VLCGNKVDIKDRKV 153
Score = 31.1 bits (67), Expect = 0.96
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +3
Query: 135 LLIGDSGVGKSCLLLRFADDTYTESYISTIGVD 233
L +GD G GK+ + R + + YI+T+GV+
Sbjct: 36 LQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVE 68
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 64.9 bits (151), Expect = 6e-11
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +3
Query: 114 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTI 224
YDYLFKLLLIGDSGVGK+C+L RF+DD + ++ISTI
Sbjct: 6 YDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
Score = 60.5 bits (140), Expect = 1e-09
Identities = 21/51 (41%), Positives = 38/51 (74%)
Frame = +2
Query: 341 AHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 493
A GI++VYD T + +F N+ +WL I+ +A ++V K+++GNKCD+ +++V
Sbjct: 125 AEGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIV 175
Score = 38.7 bits (86), Expect = 0.005
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = +1
Query: 511 QYAEQLGIPFLETSAKNSTNVEQAFMTMAAEI 606
Q A + GI FLETSAK + N+EQAF +A +I
Sbjct: 182 QIAREHGIRFLETSAKTNINIEQAFQYLAQDI 213
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 61.3 bits (142), Expect = 8e-10
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Frame = +2
Query: 266 TIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEID-RYACDN- 439
TI+LQIW AGQERF ++T YY+GA ++++D Q + +W +++D +Y +
Sbjct: 67 TIRLQIWLIAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSR 126
Query: 440 --VNKLLVGNKCDLTTKKV 490
V +LVGNK DL + V
Sbjct: 127 KPVPCILVGNKSDLPDRPV 145
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/47 (36%), Positives = 29/47 (61%)
Frame = +3
Query: 111 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTV 251
+Y FK+L++GD GK + R+ ++ + Y TIGVDF ++T+
Sbjct: 14 QYTRNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTI 60
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 60.1 bits (139), Expect = 2e-09
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 4/74 (5%)
Frame = +2
Query: 281 IWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYAC----DNVNK 448
IWDTAGQERF+++ ++YRGA ++V+D T +SF + W +E A +N
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 449 LLVGNKCDLTTKKV 490
+++GNK DL + V
Sbjct: 61 VVLGNKIDLENRAV 74
Score = 35.5 bits (78), Expect = 0.044
Identities = 16/28 (57%), Positives = 20/28 (71%)
Frame = +1
Query: 532 IPFLETSAKNSTNVEQAFMTMAAEIKAR 615
IP+ ETSAK + NVEQAF T+A A+
Sbjct: 89 IPYFETSAKEAINVEQAFQTIAKNALAQ 116
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 59.3 bits (137), Expect = 3e-09
Identities = 36/98 (36%), Positives = 50/98 (51%), Gaps = 7/98 (7%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQER--FRTITSSY---YRGAHGIIIVYDCTDQDSFSNVKQWLEEI 418
L GKT+ L I DT G+ R F S+ YR G +IV+D TD+ SF V WL+++
Sbjct: 12 LRGKTVHLHIVDTPGESRSVFHLAESTVPLIYRALSGAVIVFDVTDRKSFERVPTWLDKV 71
Query: 419 DRYACDNVNKLLVGNKCD--LTTKKVVDFSTASNMRNN 526
+ + +LVGNK D L + K+ A NN
Sbjct: 72 QEHCGHEIPVVLVGNKTDRPLNSWKIPSNVAAKYATNN 109
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +3
Query: 111 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTV 251
EYDYLFK++LIGDSGVGKS LL RF + + STIGV+F R++
Sbjct: 7 EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSI 53
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 58.4 bits (135), Expect = 6e-09
Identities = 24/50 (48%), Positives = 36/50 (72%)
Frame = +2
Query: 347 GIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVVD 496
GI++VYD T +DSF ++ QWL+ I+ A NV K+L+GNK D ++V+D
Sbjct: 4 GILLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLLGNKLDAEDERVID 53
Score = 31.5 bits (68), Expect = 0.72
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 520 EQLGIPFLETSAKNSTNVEQAFMTMAAEIK 609
E + F E SA+ NV+QAFM +A +IK
Sbjct: 62 EDNNLEFYEASARTGENVQQAFMAVARKIK 91
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 57.6 bits (133), Expect = 1e-08
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +2
Query: 245 DCRLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNV-KQWLEEID 421
D ++GK ++L +WDTAGQE + + Y I++ + DS N+ ++W E+
Sbjct: 5969 DIEVDGKQVELALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEV- 6027
Query: 422 RYACDNVNKLLVGNKCDL 475
++ C NV +LVGNK DL
Sbjct: 6028 KHFCPNVPIILVGNKKDL 6045
Score = 39.1 bits (87), Expect = 0.004
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 129 KLLLIGDSGVGKSCLLLRFADDTYTESYISTI 224
KL+++GD GK+CLL+ F+ D + E Y+ T+
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV 5962
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Frame = +2
Query: 272 KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYA-CDNVNK 448
K I DTAGQE + + Y R G + V+ + SF ++ Q+ E+I R + V
Sbjct: 278 KTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDINQYREQIKRVKDAEEVPM 337
Query: 449 LLVGNKCDLTTKKVVDFSTASNMRNNW 529
+LVGNKCDL ++ V S A + ++
Sbjct: 338 VLVGNKCDL-PQRTVSTSDAQELAKSY 363
Score = 33.9 bits (74), Expect = 0.14
Identities = 16/36 (44%), Positives = 21/36 (58%)
Frame = +1
Query: 511 QYAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARV 618
+ A+ IPF ETSAK V+ AF T+ EI+ V
Sbjct: 358 ELAKSYNIPFQETSAKTRQGVDDAFYTLVREIRKDV 393
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 5/68 (7%)
Frame = +2
Query: 260 GKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEI-----DR 424
GKT L+ WD G S +Y G +G+I+V+D T++ SF+N+++WL E+ D
Sbjct: 57 GKTFFLEFWDIGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAEVLNASKDL 116
Query: 425 YACDNVNK 448
Y +N K
Sbjct: 117 YGANNKQK 124
Score = 28.7 bits (61), Expect = 5.1
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +3
Query: 129 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVD 254
++ ++GDSGVGK+ L+ + S TIG +++ D
Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYD 49
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 54.0 bits (124), Expect = 1e-07
Identities = 24/55 (43%), Positives = 36/55 (65%)
Frame = +2
Query: 329 YYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 493
YYRGA G ++VYD ++ NV++WL+E+ +A N+ +LVGNK DL + V
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAV 56
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 53.2 bits (122), Expect = 2e-07
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Frame = +2
Query: 248 CRLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRY 427
C ++ + L I DTAGQE F + Y R G ++V+ TD+ SF + ++ +I R
Sbjct: 52 CVIDERVAHLDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQILRV 111
Query: 428 ACDNVNKLLV-GNKCDLTTKKVV 493
+++ GNK DL ++ V
Sbjct: 112 KDRTEFPMIICGNKSDLEYERTV 134
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +3
Query: 111 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTV 251
+ D +KL+++G GVGKS L ++F + Y TI ++ + V
Sbjct: 7 DVDKQYKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCV 53
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 52.8 bits (121), Expect = 3e-07
Identities = 20/54 (37%), Positives = 34/54 (62%)
Frame = +2
Query: 332 YRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 493
Y GI++VYD T+ SF + W+ I+ +A +V K+++GNKCD+ ++ V
Sbjct: 82 YEDDKGIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLGNKCDMEDRRQV 135
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/47 (53%), Positives = 33/47 (70%)
Frame = +3
Query: 114 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVD 254
YDYLFK++LIGDSGVGKS LL R+ + + +TIGV+ R V+
Sbjct: 15 YDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVE 61
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 52.0 bits (119), Expect = 5e-07
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Frame = +2
Query: 275 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRY-ACDNVNKL 451
L+I DTAG E+F ++ Y + G ++VY ++ +F+++K +I R +NV +
Sbjct: 53 LEILDTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIV 112
Query: 452 LVGNKCDLTTKKVVDFSTA 508
LVGNK D+ ++ V S A
Sbjct: 113 LVGNKSDIYDEREVSTSNA 131
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 126 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTI 224
+K++++G GVGKS L ++F + E Y TI
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI 36
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 51.6 bits (118), Expect = 6e-07
Identities = 26/75 (34%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVK-QWLEEIDRYA 430
L+GK + +WDTAGQE + + Y ++ +D + SF N++ +WL E++ +
Sbjct: 48 LDGKAYNVGLWDTAGQEDYDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHH- 106
Query: 431 CDNVNKLLVGNKCDL 475
K+LVGNK DL
Sbjct: 107 MPETPKILVGNKRDL 121
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/32 (40%), Positives = 20/32 (62%)
Frame = +3
Query: 129 KLLLIGDSGVGKSCLLLRFADDTYTESYISTI 224
KL+++GD GVGKS L+ + + YI T+
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTV 38
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 51.6 bits (118), Expect = 6e-07
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Frame = +2
Query: 263 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYA-CDN 439
K I +WD GQ++ R + Y++GA GII V D D++ V++ L + +++ +
Sbjct: 152 KNITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFEVREELTRVLQHSELNG 211
Query: 440 VNKLLVGNKCDL-----TTKKVVDFSTASNMRNNW 529
V ++V NK DL K + S + +N W
Sbjct: 212 VPVVVVANKQDLLGAIGPDKMAEELSLYKHTKNPW 246
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/83 (28%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +2
Query: 284 WDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRY-ACDNVNKLLVG 460
+ TAG E+F ++ Y + G ++VY ++ +F+++K +I R +NV +LVG
Sbjct: 40 YHTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVG 99
Query: 461 NKCDLTTKKVVDFSTASNMRNNW 529
NK D+ ++ V A ++ W
Sbjct: 100 NKSDIYDEREVSVGEAKDLAEAW 122
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/33 (39%), Positives = 21/33 (63%)
Frame = +3
Query: 126 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTI 224
+K++++G GVGKS L ++F + E Y TI
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI 36
Score = 32.7 bits (71), Expect = 0.31
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +1
Query: 517 AEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARVGPPSTGA 639
AE G PF ETSAK +NV++ F AE+ R+ TG+
Sbjct: 119 AEAWGCPFYETSAKTRSNVDKVF----AEVVRRMKTTGTGS 155
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +2
Query: 317 ITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDL 475
++++ R GI++VYD T + SF N++ WLE I + LLVGNKCD+
Sbjct: 48 VSTAQGRKGWGILLVYDITCRKSFDNLQFWLESIRKNKLQYEEILLVGNKCDV 100
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/71 (30%), Positives = 38/71 (53%)
Frame = +2
Query: 263 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNV 442
K +K+ +WDT G E + ++T ++Y + +++VY DS + VK+ + A
Sbjct: 56 KKLKIHLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNA-PAA 114
Query: 443 NKLLVGNKCDL 475
+LV NK DL
Sbjct: 115 KIVLVANKMDL 125
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Frame = +2
Query: 269 IKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEE-IDRYACDNVN 445
+ +++WD GQ RFR++ Y RG + I+ + D D D K L +++ +
Sbjct: 65 VTIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHNLLEKPQLAGIP 124
Query: 446 KLLVGNKCDL 475
L++GNK DL
Sbjct: 125 ILVLGNKKDL 134
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 263 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEE-IDRYACDN 439
K I +WD GQ++ R + YY+G GII V D D++ + L + +
Sbjct: 38 KNISFTVWDIGGQDKIRALWRVYYQGCQGIIFVVDSADRERAEEARNELHKLLAEEELQQ 97
Query: 440 VNKLLVGNKCDL 475
V L++ NK D+
Sbjct: 98 VILLVIANKQDM 109
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 45.6 bits (103), Expect = 4e-05
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Frame = +2
Query: 329 YYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRY-ACDNVNKLLVGNKCDLTTKKVV 493
Y R G II+Y TD+ SF+ Q+ ++I+R D++ +LVGNK DL K+ V
Sbjct: 5 YMRNGEGFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKREV 60
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Frame = +2
Query: 263 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEI-DRYACDN 439
K + L IWD GQ++ R + Y++G G++ V D +D K+ L + D +
Sbjct: 62 KNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVDSSDVLRMPEAKEELHGVLDSDEFRD 121
Query: 440 VNKLLVGNKCDL 475
V ++V NK DL
Sbjct: 122 VPVVVVANKQDL 133
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 44.8 bits (101), Expect = 7e-05
Identities = 25/77 (32%), Positives = 40/77 (51%)
Frame = +2
Query: 287 DTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVGNK 466
DTAG+E++ ++S Y RGA I+ YD T + S + + + A N ++VG K
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLNDRHLHLLQAAEPNCLVVIVGCK 337
Query: 467 CDLTTKKVVDFSTASNM 517
DL T + + A+ M
Sbjct: 338 KDLVTDDTREITEAAGM 354
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 44.4 bits (100), Expect = 1e-04
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 263 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWL-EEIDRYACDN 439
K IK +WD GQ++ R + Y++ G+I V D D+D K+ L + +
Sbjct: 132 KNIKFTVWDIGGQDKIRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKR 191
Query: 440 VNKLLVGNKCDL 475
L++ NK DL
Sbjct: 192 AALLVLANKQDL 203
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 44.4 bits (100), Expect = 1e-04
Identities = 25/69 (36%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Frame = +2
Query: 287 DTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEI--DRYACDNVNKLLVG 460
D GQ++ R + Y+ G+ G+I V DC D+D ++ L+ I DR D V L+
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMKD-VIILIFA 201
Query: 461 NKCDLTTKK 487
NK DL K
Sbjct: 202 NKQDLPDGK 210
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 44.0 bits (99), Expect = 1e-04
Identities = 17/27 (62%), Positives = 21/27 (77%)
Frame = +2
Query: 257 NGKTIKLQIWDTAGQERFRTITSSYYR 337
NG+ I+L +WDTAGQE F IT +YYR
Sbjct: 30 NGEDIRLMLWDTAGQEEFDAITKAYYR 56
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 43.6 bits (98), Expect = 2e-04
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +2
Query: 266 TIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVN 445
T+KLQ WD A ERF +T+ Y R G ++ + S+ +W E++ +V
Sbjct: 107 TVKLQFWDVAEHERFLKMTAVYCRNCSGALVFWGPKSPSRLSSALKWSEKVKEANSGSVP 166
Query: 446 KLLV 457
+LV
Sbjct: 167 MVLV 170
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 1/75 (1%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEIDRYA 430
+ G+ L ++DTAGQE + + Y ++ + SF NVK+ W+ EI +
Sbjct: 46 IGGEPYTLGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH- 104
Query: 431 CDNVNKLLVGNKCDL 475
C LLVG + DL
Sbjct: 105 CPKTPFLLVGTQVDL 119
Score = 34.7 bits (76), Expect = 0.078
Identities = 11/32 (34%), Positives = 21/32 (65%)
Frame = +3
Query: 129 KLLLIGDSGVGKSCLLLRFADDTYTESYISTI 224
K +++GD VGK+CLL+ + + + Y+ T+
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV 36
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +2
Query: 263 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEE-IDRYACDN 439
K I +WD GQ++ R + Y++ G+I V D D++ + K+ L + + +
Sbjct: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNKMLQEDELKD 118
Query: 440 VNKLLVGNKCDL 475
L++ NK DL
Sbjct: 119 AVVLVMANKQDL 130
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 42.3 bits (95), Expect = 4e-04
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +2
Query: 275 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLL 454
+ +WDT G E + ++T ++Y + +++VY DS + VK+ + A +L
Sbjct: 1 IHLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNA-PAAKIVL 59
Query: 455 VGNKCDL 475
V NK DL
Sbjct: 60 VANKMDL 66
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 41.5 bits (93), Expect = 7e-04
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCT-DQDSFSNVKQWLEEIDRYA 430
++G+ I+L +WDT+G E + + Y ++I +D + + + S +++W+ E+
Sbjct: 275 VDGERIELTLWDTSGHEDYDHVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCD-L 333
Query: 431 CDNVNKLLVGNKCDLTTKKVVDFSTASNM 517
C N LLVG K DL ++ + AS +
Sbjct: 334 CPNKPVLLVGCKQDLRSEVNIVSKLASKV 362
Score = 28.7 bits (61), Expect = 5.1
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +3
Query: 132 LLLIGDSGVGKSCLLLRFADDTYTESYISTI 224
++L+GDS GK+ LL + + + E Y +T+
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEKYEATV 265
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 41.5 bits (93), Expect = 7e-04
Identities = 18/68 (26%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Frame = +2
Query: 275 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVK-QWLEEIDRYACDNVNKL 451
L +WDT G + + Y+G+ I++ +D +++ +F ++ +WL E + ++ ++
Sbjct: 54 LDLWDTEGTTEYDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGSI-RV 112
Query: 452 LVGNKCDL 475
L+GNK D+
Sbjct: 113 LIGNKNDI 120
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 41.1 bits (92), Expect = 9e-04
Identities = 24/86 (27%), Positives = 40/86 (46%)
Frame = +2
Query: 275 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLL 454
L+I DTAG F + + A ++VY ++ S + EI V +L
Sbjct: 158 LEIMDTAGSYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVL 217
Query: 455 VGNKCDLTTKKVVDFSTASNMRNNWA 532
VGNK DL ++++ + A + N+A
Sbjct: 218 VGNKTDLVSEELRQSTRAQMRKTNYA 243
Score = 38.7 bits (86), Expect = 0.005
Identities = 14/35 (40%), Positives = 25/35 (71%)
Frame = +3
Query: 123 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIG 227
+F+++++G GVGK+ L+ RF T++E Y T+G
Sbjct: 107 VFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVG 141
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +2
Query: 263 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEE-IDRYACDN 439
K I +WD GQ++ R + Y++ G+I V D D++ ++ L ++ +
Sbjct: 59 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNRMLNEDELRD 118
Query: 440 VNKLLVGNKCDL 475
L+ NK DL
Sbjct: 119 AVLLVFANKQDL 130
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +2
Query: 263 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEI 418
K I +WD GQ++ R + Y++ G+I V D D++ K+ L +
Sbjct: 508 KNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERAGEAKEELSRM 559
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 39.9 bits (89), Expect = 0.002
Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 1/75 (1%)
Frame = +2
Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNV-KQWLEEIDRYA 430
+N K ++ DTAGQE F + Y A I+ + SF+NV +W+ EI +
Sbjct: 61 VNKKLCMIEFCDTAGQEDFDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREFQ 120
Query: 431 CDNVNKLLVGNKCDL 475
+LVG DL
Sbjct: 121 -PKAPIILVGTHSDL 134
Score = 33.9 bits (74), Expect = 0.14
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 129 KLLLIGDSGVGKSCLLLRFADDTYTESYIST 221
K +++GD GVGK+ LL+ + D + SY+ T
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPT 50
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 39.5 bits (88), Expect = 0.003
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +3
Query: 117 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTI 224
+YLFK+L+IGD GVGK+ L+ R+ ++ Y +T+
Sbjct: 669 EYLFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATV 704
Score = 38.7 bits (86), Expect = 0.005
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = +2
Query: 329 YYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRY----ACDNVNKLLVGNKCDLTTKKVVD 496
YY+ A G IV+D T +FS V++W ++D + + + +L+ NKCD + +V+
Sbjct: 710 YYKEAVGAFIVFDVTRASTFSAVQKWKNDLDNKLQLPSGEPIPAVLLANKCDQAKEGLVN 769
Query: 497 FS 502
S
Sbjct: 770 NS 771
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 38.7 bits (86), Expect = 0.005
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +2
Query: 272 KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLE 412
KL IWD GQ R+ +Y+ G+I V D DQ ++ K L+
Sbjct: 3 KLNIWDVGGQRSLRSYWRNYFESTDGLIWVVDSADQRRLADCKMELQ 49
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/37 (51%), Positives = 22/37 (59%)
Frame = +3
Query: 117 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIG 227
DYL K+LLIGDS VGK+ LLL F + T G
Sbjct: 10 DYLLKVLLIGDSNVGKTKLLLTFLGQESIVQQMPTAG 46
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 37.1 bits (82), Expect = 0.015
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +2
Query: 251 RLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCT 373
+ G+ L++ DTAGQ+ + SY G HG I+VY T
Sbjct: 48 KYKGQEFFLELVDTAGQDEYSIFPQSYSMGIHGYILVYAVT 88
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 129 KLLLIGDSGVGKSCLLLRFADDTYTESYISTI 224
K+ ++G VGKS L ++F + + +SY TI
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTI 39
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 36.7 bits (81), Expect = 0.019
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 117 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTI 224
D+++++ L+GD GVGK+ LL+RF + Y TI
Sbjct: 3 DHVYRIALLGDEGVGKTALLVRFLCHRFLGEYDPTI 38
Score = 31.5 bits (68), Expect = 0.72
Identities = 14/48 (29%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +2
Query: 266 TIKLQIWDTAGQ-ERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQW 406
T+ L+I DTA + + + + R G I+VY D+ +F+N+ ++
Sbjct: 52 TVTLEILDTASRGQNSCKLRDQFVREGDGFIVVYSTADRSTFANLHRY 99
>SB_39298| Best HMM Match : Ras (HMM E-Value=0.11)
Length = 64
Score = 36.7 bits (81), Expect = 0.019
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 314 TITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEI-DRYACDNVNKLLVGNKCDL 475
++ S R A I+VY TD++SF+ Q +E + D V+ LVGNK DL
Sbjct: 4 SLYESSIRWADAFIVVYSITDKNSFNTAVQLVEAVYYGKGTDEVHVALVGNKTDL 58
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 36.7 bits (81), Expect = 0.019
Identities = 25/87 (28%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Frame = +2
Query: 245 DCRLNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDR 424
+ R+ +++L I DTAG +SY G ++VY TD S+ +Q ++ + +
Sbjct: 7 ELRIGDSSMELDILDTAGNGE-----ASYIHNGDGFVVVYSITDYYSYEMARQLVKLVTQ 61
Query: 425 Y-ACDNVNKL---LVGNKCDLTTKKVV 493
D++ ++ LVGNK DL + V
Sbjct: 62 VRKTDDICQIPIVLVGNKRDLRRGRCV 88
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 36.3 bits (80), Expect = 0.025
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Frame = +2
Query: 317 ITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDR-----YACDNVNKLLVGNKCDLTT 481
+ + +Y+ G ++VYD T ++SF + WL+EI + ++V ++ NK D +
Sbjct: 6 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVD-SR 64
Query: 482 KKVVDFSTASNMRNNWAF 535
K++V+ S N F
Sbjct: 65 KRLVEESEGRQWAENHKF 82
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/44 (36%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +3
Query: 126 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKI-RTVD 254
+ L+L+G +GVGKS LL+RF + Y T+ + + + T+D
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSATID 171
Score = 30.3 bits (65), Expect = 1.7
Identities = 23/70 (32%), Positives = 30/70 (42%), Gaps = 3/70 (4%)
Frame = +2
Query: 275 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLE---EIDRYACDNVN 445
L I DTA T Y G I+VY + +F KQ ++ EI +
Sbjct: 177 LHITDTAS-----TYEPVYLSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTL 231
Query: 446 KLLVGNKCDL 475
+L GNKCDL
Sbjct: 232 IVLAGNKCDL 241
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 35.9 bits (79), Expect = 0.034
Identities = 15/25 (60%), Positives = 21/25 (84%)
Frame = +1
Query: 511 QYAEQLGIPFLETSAKNSTNVEQAF 585
Q A+QLG+ F ETSAK++TNV++ F
Sbjct: 37 QLADQLGLEFYETSAKDNTNVKKVF 61
Score = 31.5 bits (68), Expect = 0.72
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = +2
Query: 413 EIDRYACDNVNKLLVGNKCDLTTKKVVDFSTASNM 517
++ Y+ N +LVGNKCD+ ++VV + +
Sbjct: 4 QVKTYSWANAQVILVGNKCDMEEERVVSYDRGKQL 38
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 35.9 bits (79), Expect = 0.034
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Frame = +2
Query: 275 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEE-IDRYACDN--VN 445
L + DT+G E +R +T Y + ++ + D S S++++W + +D + D+ V
Sbjct: 65 LYLLDTSGLEEYRELTKIYLKNLDCVVFTFALNDPHSLSSLEKWNNDFLDVFLGDSSRVL 124
Query: 446 KLLVGNKCD 472
K ++G K D
Sbjct: 125 KFVLGCKID 133
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 35.9 bits (79), Expect = 0.034
Identities = 12/36 (33%), Positives = 23/36 (63%)
Frame = +2
Query: 317 ITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDR 424
+ + +Y+ G ++VYD T ++SF + WL+EI +
Sbjct: 1 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEIKK 36
>SB_214| Best HMM Match : Arf (HMM E-Value=0)
Length = 148
Score = 35.9 bits (79), Expect = 0.034
Identities = 17/70 (24%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 269 IKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEE-IDRYACDNVN 445
++ +D G + R I Y+ +GI+ + DC D + + K+ L+ + +
Sbjct: 20 MRFTTFDLGGHRQARRIWKDYFPAVNGIVFIIDCADFERLAESKKELDSLLADEQLSSCP 79
Query: 446 KLLVGNKCDL 475
L++GNK D+
Sbjct: 80 VLILGNKIDI 89
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 35.5 bits (78), Expect = 0.044
Identities = 18/71 (25%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Frame = +2
Query: 320 TSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYA--CDNVNKLLVGNKCDLTTKKVV 493
T S + + +I+ YD +++ SF+ +WLE A +N+ L+ K DL ++V+
Sbjct: 55 TDSVWEHPNLVIVAYDVSNEQSFNACNKWLERCRSLAKSDNNLPGALIATKTDLKQRRVI 114
Query: 494 DFSTASNMRNN 526
+ N+
Sbjct: 115 STKQGKDYANS 125
Score = 33.9 bits (74), Expect = 0.14
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Frame = +3
Query: 129 KLLLIGDSGVGKSCLLLRFADD--TYTESYISTIGVDFKIRTVD 254
K+L+ GDS VGKS L+ F D Y ++Y T+G + ++ V+
Sbjct: 7 KVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVN 50
>SB_58754| Best HMM Match : PucR (HMM E-Value=5.5)
Length = 232
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -2
Query: 517 HIASCTKVDNLFSGQVTLVTDEQFVHIVTSVTINL 413
HI++ T + N + +TL D +F+HI T+VTI L
Sbjct: 122 HISTTTSLHNANTITITLELDRRFIHISTTVTITL 156
>SB_18664| Best HMM Match : PucR (HMM E-Value=5.5)
Length = 232
Score = 33.9 bits (74), Expect = 0.14
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -2
Query: 517 HIASCTKVDNLFSGQVTLVTDEQFVHIVTSVTINL 413
HI++ T + N + +TL D +F+HI T+VTI L
Sbjct: 122 HISTTTSLHNANTITITLELDRRFIHISTTVTITL 156
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 33.5 bits (73), Expect = 0.18
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Frame = +2
Query: 263 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNV 442
K I+ ++WD G+E+ R + +Y R +I V D T + L + A N
Sbjct: 64 KGIRFKVWDIGGREQNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNG 123
Query: 443 NKLLV-GNKCD 472
+L+ NK D
Sbjct: 124 APILIFANKQD 134
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 33.5 bits (73), Expect = 0.18
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 374 DQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVV 493
D +SF +W++++ ++V +LVGNK DL+ K+ V
Sbjct: 10 DYNSFQQTSKWIDDVRTERGNDVIIMLVGNKTDLSDKRQV 49
Score = 31.5 bits (68), Expect = 0.72
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +1
Query: 517 AEQLGIPFLETSAKNSTNVEQAFMTMAAEI 606
A++L + F+ETSAK NV+Q F +AA +
Sbjct: 58 AKELNVMFIETSAKAGYNVKQLFRRVAAAL 87
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 33.1 bits (72), Expect = 0.24
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 117 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIG 227
+ LFK+L++GD+ VGK+ + R+ Y TIG
Sbjct: 20 EILFKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 33.1 bits (72), Expect = 0.24
Identities = 15/36 (41%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +3
Query: 117 DYL-FKLLLIGDSGVGKSCLLLRFADDTYTESYIST 221
DY+ KL ++GD VGK+ L + A +T+ YI T
Sbjct: 3 DYVTLKLYIVGDGAVGKTALFITAATNTFPTEYIPT 38
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 33.1 bits (72), Expect = 0.24
Identities = 16/44 (36%), Positives = 26/44 (59%)
Frame = +3
Query: 123 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVD 254
+F+L ++G GVGKS + +R+ + +TE I G + I VD
Sbjct: 2598 MFRLCVVGSGGVGKSSVTIRYLKNEFTE--IDYCGKLYDIEVVD 2639
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = +2
Query: 260 GKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDR 424
GK +++ DTAGQE + + S ++++ S++ +K +I R
Sbjct: 2630 GKLYDIEVVDTAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIR 2684
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 32.3 bits (70), Expect = 0.41
Identities = 20/73 (27%), Positives = 34/73 (46%)
Frame = +2
Query: 257 NGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACD 436
N +T +LQI DT+G F + ++VY +SF+ + ++ EI +
Sbjct: 72 NNETYELQIIDTSGTYEFPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILEGGKN 131
Query: 437 NVNKLLVGNKCDL 475
++V NK DL
Sbjct: 132 RHPCIVVCNKNDL 144
Score = 31.9 bits (69), Expect = 0.55
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +3
Query: 126 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTV 251
F ++ G S VGK+ L+LRF + + Y TI DF I+ V
Sbjct: 29 FTIVFFGASSVGKTSLILRFLGYAFNDDYSPTI-EDFFIKHV 69
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 31.9 bits (69), Expect = 0.55
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 123 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTI 224
+ K+++IG+ GVGKS L +RF + Y T+
Sbjct: 861 IVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTL 894
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 31.5 bits (68), Expect = 0.72
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +3
Query: 126 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIG 227
+ ++++G +GVGK+ L++RF + Y T+G
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 31.5 bits (68), Expect = 0.72
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 517 AEQLGIPFLETSAKNSTNVEQAFMTMAAEI 606
A++LG+PF ETSA+ + NV F + I
Sbjct: 35 AKELGLPFFETSAEKNINVTDCFEALVDSI 64
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 31.5 bits (68), Expect = 0.72
Identities = 15/65 (23%), Positives = 37/65 (56%)
Frame = +2
Query: 332 YRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYACDNVNKLLVGNKCDLTTKKVVDFSTAS 511
Y+G HG++++ D T +F+ V++ L ++ ++ L++ N+ D+ ++VD +
Sbjct: 278 YKGTHGVLMLLDITKPWTFTYVRRELPKVP----PHIPVLVLANRRDMEEHRLVDAEEIT 333
Query: 512 NMRNN 526
+ N+
Sbjct: 334 SFINS 338
Score = 30.3 bits (65), Expect = 1.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 120 YLFKLLLIGDSGVGKSCLLLRFADDTYTESYIST 221
Y K+++ GD GK+C+ R + E YI T
Sbjct: 224 YNMKIVIKGDRNTGKTCMFHRLHGKPFNEQYIPT 257
>SB_55159| Best HMM Match : Ribosomal_S17e (HMM E-Value=2.8)
Length = 250
Score = 31.1 bits (67), Expect = 0.96
Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = +2
Query: 260 GKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCT-DQDSFSNVKQWLEEIDR 424
G TI L WD AGQ + + + + V++ T ++ N++ WL I R
Sbjct: 3 GPTITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNIKR 58
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 31.1 bits (67), Expect = 0.96
Identities = 15/42 (35%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Frame = +3
Query: 129 KLLLIGDSGVGKSCLLLRFADDTYTESYISTIG-VDFKIRTV 251
+++++G GVGKS L +R + Y ST+G + F I T+
Sbjct: 18 RVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLGEMGFYINTM 59
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/38 (31%), Positives = 27/38 (71%), Gaps = 2/38 (5%)
Frame = +3
Query: 129 KLLLIGDSGVGKSCLLLR--FADDTYTESYISTIGVDF 236
+++++GDS VGK+CLLL+ + +T + ++ +I ++
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNY 57
>SB_48157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1306
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
Frame = +3
Query: 120 YLFKLLL--IGDSGVGKSCLLLRFADDTYTESYISTI 224
YL KL + +G+ VGKS L+ F + + E Y+ TI
Sbjct: 24 YLKKLTIAVLGEGRVGKSSLIRGFCGEGFQEEYVPTI 60
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Frame = +2
Query: 260 GKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCT-DQDSFSNVKQWLEEI 418
G TI L WD AGQ + + + + V++ T ++ N++ WL I
Sbjct: 724 GPTITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNI 777
>SB_36446| Best HMM Match : GTP_CDC (HMM E-Value=0)
Length = 384
Score = 29.5 bits (63), Expect = 2.9
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 1/34 (2%)
Frame = +3
Query: 126 FKLLLIGDSGVGKSCLL-LRFADDTYTESYISTI 224
F ++++G+SG+GKS LL F D YT S +I
Sbjct: 25 FTVMVVGESGLGKSTLLNSLFLTDLYTPSSYPSI 58
>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 532 IPFLETSAKNSTNVEQAFMTMA 597
+ F+ETSAK NV+ AFM +A
Sbjct: 152 VAFMETSAKTGLNVDLAFMAIA 173
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 29.1 bits (62), Expect = 3.9
Identities = 11/32 (34%), Positives = 22/32 (68%)
Frame = +3
Query: 129 KLLLIGDSGVGKSCLLLRFADDTYTESYISTI 224
KL ++GD+ VGK+C+L R+ ++ + + T+
Sbjct: 10 KLKVVGDTNVGKTCILYRWFLESQSPQDVYTV 41
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 29.1 bits (62), Expect = 3.9
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +3
Query: 108 PEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTI 224
PE D K++ +GD VGK+ L + +I++I
Sbjct: 4 PELDPTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI 42
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 28.7 bits (61), Expect = 5.1
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 449 LLVGNKCDLTTKKVVDFSTASNMRNNWA 532
+LVGNKCDL ++VV N+ +A
Sbjct: 2 VLVGNKCDLEDERVVGKDQGQNLAKQFA 29
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 28.3 bits (60), Expect = 6.7
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +3
Query: 129 KLLLIGDSGVGKSCLLLR 182
KL+L+GD+G+GKS L+ +
Sbjct: 7 KLVLVGDAGIGKSTLIAK 24
>SB_25230| Best HMM Match : NACHT (HMM E-Value=0.0015)
Length = 1238
Score = 28.3 bits (60), Expect = 6.7
Identities = 13/31 (41%), Positives = 21/31 (67%)
Frame = +3
Query: 132 LLLIGDSGVGKSCLLLRFADDTYTESYISTI 224
LLL+G++G GKS ++ R A D +S ++I
Sbjct: 463 LLLVGNAGSGKSAIMARAACDALDKSSSNSI 493
>SB_7861| Best HMM Match : MMR_HSR1 (HMM E-Value=0.96)
Length = 244
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 126 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTI 224
FK+ ++G S VGK+ L+ +T +I TI
Sbjct: 188 FKMAILGGSAVGKTSLMRALFKKPFTNEHIPTI 220
>SB_52502| Best HMM Match : GTP_CDC (HMM E-Value=1.9e-06)
Length = 101
Score = 27.9 bits (59), Expect = 8.9
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Frame = +3
Query: 126 FKLLLIGDSGVGKSCLL-LRFADDTYTESYI 215
F L+++G+SG+GKS L+ F D Y++ I
Sbjct: 25 FTLMVVGESGLGKSTLIDSLFLTDLYSDRKI 55
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,771,033
Number of Sequences: 59808
Number of extensions: 381620
Number of successful extensions: 1106
Number of sequences better than 10.0: 104
Number of HSP's better than 10.0 without gapping: 955
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1949964354
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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