Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0400
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.            94   3e-21
AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small...    48   2e-07
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    35   0.002
X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein...    23   7.3  

>EF127647-1|ABL74413.1|  213|Anopheles gambiae Rab5 protein.
          Length = 213

 Score = 94.3 bits (224), Expect = 3e-21
 Identities = 39/85 (45%), Positives = 55/85 (64%)
 Frame = +2

Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQWLEEIDRYAC 433
           ++  T+K +IWDTAGQER+ ++   YYRGA   I+VYD  + DSF+  K W++E+ R A 
Sbjct: 68  IDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNSDSFARAKTWVKELQRQAS 127

Query: 434 DNVNKLLVGNKCDLTTKKVVDFSTA 508
            N+   L GNK DL   +VVD+  A
Sbjct: 128 PNIVIALAGNKADLANSRVVDYEEA 152



 Score = 42.7 bits (96), Expect = 1e-05
 Identities = 21/42 (50%), Positives = 28/42 (66%)
 Frame = +3

Query: 126 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTV 251
           FKL+L+G+S VGKS L+LRF    + E   STIG  F  +T+
Sbjct: 25  FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTL 66



 Score = 38.7 bits (86), Expect = 2e-04
 Identities = 21/65 (32%), Positives = 35/65 (53%)
 Frame = +1

Query: 511 QYAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARVGPPSTGAAPAGHVKIDQGQPIDTG 690
           QYA+   + F+ETSAK + NV   F+ +A ++     P + GA P  +++  Q +  +  
Sbjct: 154 QYADDNRLLFMETSAKTAVNVNDIFLAIAKKL-----PKNEGAGPQQNIRPTQNE-TNRQ 207

Query: 691 KSSCC 705
            S CC
Sbjct: 208 NSGCC 212


>AJ438610-3|CAD27475.1|  190|Anopheles gambiae putative RHO small
           GTPase protein.
          Length = 190

 Score = 48.4 bits (110), Expect = 2e-07
 Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
 Frame = +2

Query: 254 LNGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNV-KQWLEEIDRYA 430
           ++G  + L +WDTAGQE +  +    Y      +I Y      SF NV  +W  EI ++ 
Sbjct: 49  VDGVQVSLGLWDTAGQEDYDRLRPLSYPQTDVFLICYSVASPSSFENVTSKWYPEI-KHH 107

Query: 431 CDNVNKLLVGNKCDL 475
           C +   +LVG K DL
Sbjct: 108 CPDAPIILVGTKIDL 122



 Score = 33.9 bits (74), Expect = 0.005
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +3

Query: 129 KLLLIGDSGVGKSCLLLRFADDTYTESYIST 221
           K +++GD  VGK+C+L+ +  D++   Y+ T
Sbjct: 8   KCVVVGDGTVGKTCMLISYTTDSFPGEYVPT 38


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 35.1 bits (77), Expect = 0.002
 Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
 Frame = +2

Query: 290 TAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEIDRYACDNVNKLLVGNK 466
           +AGQE +  +    Y      ++ +      SF NVK+ W+ EI  + C     LLVG +
Sbjct: 1   SAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHH-CQKTPFLLVGTQ 59

Query: 467 CDL 475
            DL
Sbjct: 60  IDL 62


>X87410-1|CAA60857.1|  498|Anopheles gambiae maltase-like protein
           Agm1 protein.
          Length = 498

 Score = 23.4 bits (48), Expect = 7.3
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +2

Query: 365 DCTDQDSFSNVKQWLEEI 418
           D T Q  + N+K+WL+ +
Sbjct: 329 DTTGQQFYDNIKRWLDVV 346


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 664,476
Number of Sequences: 2352
Number of extensions: 12184
Number of successful extensions: 28
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)