Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= e40h0399
         (679 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   3.0  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   5.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   9.3  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   9.3  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.3  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.3  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +1

Query: 511 YLYYHSVKLFILENKTRNFNIVIFNQI 591
           Y Y+  V + I   K RN N+++  Q+
Sbjct: 158 YTYFLCVIVCIFRGKYRNINLLLTEQL 184


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/36 (33%), Positives = 18/36 (50%)
 Frame = +1

Query: 334 GKLDALIQFWVIFGYSCSENKTREFFVLLYLIQFIN 441
           G LD+LI   V+        KT+E+  L    Q+I+
Sbjct: 81  GSLDSLILLMVLVSIILGSLKTKEWAKLNNKFQYID 116


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = +1

Query: 289 PVFIYTLGVGQTRPCGKLDALIQFWVIFGYSCSENKTREFFVLLYL 426
           PV +  + VG         + + F    G S  E KTR +F+  ++
Sbjct: 14  PVSVILISVGWWENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFV 59


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = +1

Query: 289 PVFIYTLGVGQTRPCGKLDALIQFWVIFGYSCSENKTREFFVLLYL 426
           PV +  + VG         + + F    G S  E KTR +F+  ++
Sbjct: 247 PVSVILISVGWWENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFV 292


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 12/46 (26%), Positives = 20/46 (43%)
 Frame = +1

Query: 289 PVFIYTLGVGQTRPCGKLDALIQFWVIFGYSCSENKTREFFVLLYL 426
           PV +  + VG         + + F    G S  E KTR +F+  ++
Sbjct: 247 PVSVILISVGWWENFVSETSYLPFIRALGKSKKEFKTRTYFIYAFV 292


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = -2

Query: 198 NQPKLQSWS*VDRASAPKGGRAALPAAPEIIQNQTRWGERRSPLSVNNA 52
           +QP  + +S  D+      GR A   +PE  +   R  E   P + N A
Sbjct: 277 HQPSSEVYSMFDKLLLMSEGRTAFLGSPEEAETFFRELEAPCPRNYNPA 325


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 14/49 (28%), Positives = 21/49 (42%)
 Frame = -2

Query: 198 NQPKLQSWS*VDRASAPKGGRAALPAAPEIIQNQTRWGERRSPLSVNNA 52
           +QP  + +S  D+      GR A   +PE  +   R  E   P + N A
Sbjct: 277 HQPSSEVYSMFDKLLLMSEGRTAFLGSPEEAETFFRELEAPCPRNYNPA 325


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,060
Number of Sequences: 336
Number of extensions: 4383
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)